Gene Cphy_1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1864 
Symbol 
ID5743153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand+ 
Start bp2293073 
End bp2293687 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content35% 
IMG OID641292961 
ProductTetR family transcriptional regulator 
Protein accessionYP_001558972 
Protein GI160880004 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.370614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTACAA AGGAATTAAT TTTAAATAAA TCGTTACAGC TTTTTTCAGA AAGAGGTTAT 
GAAGGAGTTT CTATGCGTGA TATTGCAGCA GAAGTTGGTA TTAAAGCAGC ATCCATTTAT 
AATCATTTTT CAAGCAAAGA AGAGATATTC AATCATTTGT TAGAGGAAAT GGATTTACGC 
TATAATCAAG CAGTCAGTGC AATCGGTGTA CCAGAAGGGA GTGCGAAAGA GGCAGCAAAT 
AGTTACGTTG GTATATCAGA AGAGCACTTA CATGAAATTG CAAAAGGCTT ATTCTTGTAT 
TTCTTGAAAG ATGAATTTGC CGCACCATTT CGACGAATGG TTACTGCAGA GCAATACCGT 
CATTCTATCG CTGGTGATAC CTTTCAAAAG ATGTATGTTA GTAGTGCATT GGAGTTTCAA 
TCTTCCTTAT TTGAAACTCT GATTACACAG GGAGTTTTTA CAGATAGTAA TCCGCAAACG 
GTAGCCCTAC ATTTTTATGC ACCGATCTTC TTATTATTAT CAAAATATGA TAAAAAGCCA 
GAAAGTGAAT CGGAAGCATT AAATGAACTG AAAAATCATG TAAGTCAATT TTCTAGATTA 
TATTCTCGGA GGTAG
 
Protein sequence
MSTKELILNK SLQLFSERGY EGVSMRDIAA EVGIKAASIY NHFSSKEEIF NHLLEEMDLR 
YNQAVSAIGV PEGSAKEAAN SYVGISEEHL HEIAKGLFLY FLKDEFAAPF RRMVTAEQYR 
HSIAGDTFQK MYVSSALEFQ SSLFETLITQ GVFTDSNPQT VALHFYAPIF LLLSKYDKKP 
ESESEALNEL KNHVSQFSRL YSRR