Gene Cphy_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1838 
Symbol 
ID5743127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand+ 
Start bp2271003 
End bp2271590 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content33% 
IMG OID641292935 
ProductTetR family transcriptional regulator 
Protein accessionYP_001558946 
Protein GI160879978 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAGAG AAGAGCAAAA GATACGTAGT GAGTTGATTC GGCAAAAGAT TCTCGATACT 
GCGCTAGAGA TGGGAATAGA AGAGGGATTT GAGGCAGTAT CAATTAGAAA GATTATACAA 
AAGATGAAAT ATTCTACTGG TGTTGTCTAT CATCACTTCA AAGATAAACA AGAGATTTTA 
GATGCCATCG AAGTAGCCGA GACAGGATGG TTACGGTCTC AAATTTTAGA ATTATTAGAT 
GATGAAAAAG ATGTTATTAC CAATATGAAG ACAGTATTTC ATCGGATACT TCTTTTGGCA 
TTTGAGGAGC CTGAGAAATA CAATCTAATT GTACTTCATA AATACAGTAG ACGAAAATCT 
GATAAGCCAG AATGGATATC CAATATCAGT AGAAATTTAA AAGAAGGTAT GGACGCAGGA 
TTAATTAAGA AAATGGATTC TGATAAAGCT GCATTTTCCA TCTGGAGCTC ATTTCTTGGA 
TTTAACCTTA TGATATCGAG AGATACAGAT TTAACCTTAG AACAAGCTCA AGCTTTATTT 
AATATTCAAT TTGATATTAT ATTAGGAGGG ATTCTTAATC ATGAATAA
 
Protein sequence
MAREEQKIRS ELIRQKILDT ALEMGIEEGF EAVSIRKIIQ KMKYSTGVVY HHFKDKQEIL 
DAIEVAETGW LRSQILELLD DEKDVITNMK TVFHRILLLA FEEPEKYNLI VLHKYSRRKS 
DKPEWISNIS RNLKEGMDAG LIKKMDSDKA AFSIWSSFLG FNLMISRDTD LTLEQAQALF 
NIQFDIILGG ILNHE