Gene Cphy_1837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1837 
Symbol 
ID5743126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand- 
Start bp2269861 
End bp2270469 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content33% 
IMG OID641292934 
ProductTetR family transcriptional regulator 
Protein accessionYP_001558945 
Protein GI160879977 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATAGTT TTTTTAACCT TCGCGCCGAA AAACAAGAGC ATATCATAAA CGCTGCACTT 
AACGCATTTG GTCGAAATGG ATATAAGAAA GCTTCTATTG CTGATATCGC TAAAGAAGCA 
GGTATTGCAA AAGGAATGGT CATGTATTAT TTCGGTAGTA AAAAAAACTT ATATCTGTAC 
TTAGTAAATC TTAGCGGTAA ACTATTAATC GAAGAAATCG AAAGAGGGAT GGATCAAAGC 
GTCACGGATT TTTTTGATAA AATAAAGATG GTTTCAGATA TAAAGATAGC CATGATGAAA 
AAACATCCTG CAATCATTTC ATTTTTATCA AGCATGTTCT TTGAAACCGA CGAGGAAGTG 
AGGGACGATA TAAAAGCATT TATATCTGAC GGTATAAAGG TCCGCGCAGA GAAAGTATTC 
GACGGAACCG ACGTTTCAAA ATTCAAAGAT GATGTTGATC CGAAATTACT GAACAAATTT 
ATTCTGTGGG CAGGAGAAGG ATTAACGAAC GATTTACATT TGAATGATAA TATGGATAAG 
GTTGATGTAT TTATTAAGGA TTTTTATGAG TGCCTTGATT TTATGAAAAA ATATTTCTAT 
AAAAGGTAA
 
Protein sequence
MDSFFNLRAE KQEHIINAAL NAFGRNGYKK ASIADIAKEA GIAKGMVMYY FGSKKNLYLY 
LVNLSGKLLI EEIERGMDQS VTDFFDKIKM VSDIKIAMMK KHPAIISFLS SMFFETDEEV 
RDDIKAFISD GIKVRAEKVF DGTDVSKFKD DVDPKLLNKF ILWAGEGLTN DLHLNDNMDK 
VDVFIKDFYE CLDFMKKYFY KR