| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1810 |
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| Symbol | |
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| ID | 5743099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 2234673 |
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| End bp | 2236013 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 641292907 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001558918 |
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| Protein GI | 160879950 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.108169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAGTA CAAGAGATCT TCTTAATGGT AACGAAACAA AAACAATGAT TCATTTTGCC
ATTCCAATGA TAATAGGTAA TATCTTTCAA CAATTATATA ATGTTGCTGA TACTATTATC
GTAGGTAAAT TTATAGGCCC TAATGCTCTG GCTGCAGTGG GTAGTTCGTT TACAGTTATG
GTCTTATTAA CCTCTATTAT CATCGGATTT TGCATGGGTA GTGGAGCAGT TTTCTCTTTA
AATTATGGTG CTAACGAAAT TGATAAATTA AAAAACAGCT TTTTTACATC CTTTATTTTT
ATTGGAATTG TCACCATTGT TATTAACTTA CTCTCAATTA TATTTATTGA CGAAATTTTA
ACCTTTATCA ATATCCCTCC AGAAGTTCTC AGTGATTCGA AGACCTACCT GCAAATTATC
TTTTTAGGAA TTGGTTTTAC CTATATCTAT AACTATTTTA GTGCTGTTAT GCGTAGTTTA
GGGAATTCAA TCGTTCCGCT AGTATTTTTA ATTATGTCTG CTATCATAAA TATCGTACTG
GATATCATTT TTGTCGTGCC ATTACATATG GGTATTGCTG GTGCAGCTTA TGCTACGATT
ATTGCACAAG GATTTTCAGC AATTGGTATT GCAATTTTTT GTATGTTTCA TGTTCCTCAG
ATTCGTCTGA AACGGGAACA TCTATATTTA AATAAGAGTG TTGTAACAAT GGTTTCGAAT
TACTCCATCC TCTCAAGCAT ACAATATTCA ATTATGAATT TTGGAATATT AATGATTCAA
GGATTGGTAA ATAGCTTCGG TGTTTCAACA ATGGCTGCCT TTACTGCAGT AGTTAAAATA
GAAAGTTTTG CTTACATGCC GGTACAGGAT TTTGGTAACG CATTTTCAAC CTTTATTGCT
CAAAATATGG GAGCAAAAAA ATTAGAACGT ATTCGTACTG GAATACGCTC AGCGGTTAAA
ATAATTACTA TTTACTGTAT CATTATTTCA GTTTTCATAT TATTATTTGC AAAACCTTTA
ATGTACATAT TTGTTAATAA AGAAGAAACA GAAATATTAA AGATTGGCAT TCAATACCTA
TGGATTGTAG CTGGCTTTTA TTGCTTAATT GGATATTTAT TTATGTTCTA TGGTTTATTT
CGAGGACTTG GTAAACCTGG TATATCAATC GTCCTTACAA TGGTAAGTTT AGGCACTAGA
GTTATATTAG CTTATATACT TTCCTCAGTA TCTTTCATTG GATTAGTTGG AATATGGTGG
TCTATCCCAA TTGGGTGGGC CTTGGCAGAC ATCATTGGTA TTATATTTAT AAGATATCAA
TTTACGTCTA GTAACTTTTG A
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| Protein sequence | MKSTRDLLNG NETKTMIHFA IPMIIGNIFQ QLYNVADTII VGKFIGPNAL AAVGSSFTVM
VLLTSIIIGF CMGSGAVFSL NYGANEIDKL KNSFFTSFIF IGIVTIVINL LSIIFIDEIL
TFINIPPEVL SDSKTYLQII FLGIGFTYIY NYFSAVMRSL GNSIVPLVFL IMSAIINIVL
DIIFVVPLHM GIAGAAYATI IAQGFSAIGI AIFCMFHVPQ IRLKREHLYL NKSVVTMVSN
YSILSSIQYS IMNFGILMIQ GLVNSFGVST MAAFTAVVKI ESFAYMPVQD FGNAFSTFIA
QNMGAKKLER IRTGIRSAVK IITIYCIIIS VFILLFAKPL MYIFVNKEET EILKIGIQYL
WIVAGFYCLI GYLFMFYGLF RGLGKPGISI VLTMVSLGTR VILAYILSSV SFIGLVGIWW
SIPIGWALAD IIGIIFIRYQ FTSSNF
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