| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1731 |
|---|
| Symbol | |
|---|
| ID | 5741482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 2133430 |
|---|
| End bp | 2134290 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641292831 |
|---|
| Product | respiratory-chain NADH dehydrogenase subunit 1 |
|---|
| Protein accession | YP_001558842 |
|---|
| Protein GI | 160879874 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0650] Formate hydrogenlyase subunit 4 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0032732 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTATTC TATTAGGTAT ATTGTTTATT ATTTTAGCTC CGCTGGTTGG CGGTCTTTTG
ACAGGGATTG ACCGTGTTAT CACTGCAAGA TTGCAGGGAA GGCAAGGGCC GCCTGTATTA
CAGCCTTTTT ACGATGTATT CAAGCTAATT CAAAAGGAAT CTATTCAAGT GAATTCCTTA
CATCGTTTTT ATGTATATTT ATCCTTGGTA TTTGTAGTAT TTACCTCCGG GATATTACTG
GTTGGTGGAG ATATGCTGTT GGCTGTTTTC GCCCTGACCT TAGGCACCGT ATTTTTTGTT
CTGGGAGGTT ACTCCACCAG ATCCCCATAC AGTACCATTG GTGCAGAGCG TGAGTTGCTT
CAGATTATGT CTTATGAACC CATGGTATTA TTAACTTGTG TAAGCCTTTA TTATGTGAAA
GGTAGCTTTT TTGTAAAAAA TATTATTGCC AAAGATGTTC CTGCAATTAT TTATCTTCCG
GGCGTATTCA TTGGATTAAT TTATATCATT ACCATTAAGC TTAGAAAATC ACCCTTTGAT
CTTAGTACGT CACATCATGG ACATCAGGAA ATCGTTAAGG GCATTACCAC AGAGTATTCC
GGCAGAGATC TTGCAGTAAT TGAGATTACC CACTGGTATG AGGTTATCAT TACATTGACC
TTGGTATTTG TATTCTTTGC GACCTCCTCA GTGCTTAGTC GCGTACTTGC AGTAGTTGCT
TGCTTAGTCG TATATTTTCT TGAGATTGTC ATTGACAATG CTTTTGCACG CTATAAGTGG
CAGCAAACCC TAAAATATTC ATGGATTGTT ACTGGTGTTC TGACAACACT AAACCTGATC
GTATTGTCCT TCTTCCACTG A
|
|---|
| Protein sequence | MVILLGILFI ILAPLVGGLL TGIDRVITAR LQGRQGPPVL QPFYDVFKLI QKESIQVNSL
HRFYVYLSLV FVVFTSGILL VGGDMLLAVF ALTLGTVFFV LGGYSTRSPY STIGAERELL
QIMSYEPMVL LTCVSLYYVK GSFFVKNIIA KDVPAIIYLP GVFIGLIYII TIKLRKSPFD
LSTSHHGHQE IVKGITTEYS GRDLAVIEIT HWYEVIITLT LVFVFFATSS VLSRVLAVVA
CLVVYFLEIV IDNAFARYKW QQTLKYSWIV TGVLTTLNLI VLSFFH
|
|---|
| |