| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1688 |
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| Symbol | |
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| ID | 5741519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 2071762 |
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| End bp | 2073555 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641292788 |
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| Product | two component regulator propeller domain-containing protein |
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| Protein accession | YP_001558799 |
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| Protein GI | 160879831 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3292] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.216388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA TTTATCTATC TCTATTGCTT GTGCCATTGT TATTGCTTGC AGCATTCTTA
TTAGTTCCTA AAAAAACGTC CTCTGCACCA TGGATACAAA CCAATGGACC ATACGGTGGT
TATATTCATT GTTTCGCAAT TGAGGGTAAG AATATATATG CCGGAACGGA AGGCGGTGGC
ATTTTTCTTT CCAGCGATGG TGGTACAAGC TGGAATGAGA TCAATTCAGG ATTGACAAAT
AAGAATGTCT ATTCCCTAGC TGTAGGTGGT ACTAATATCT TTGCCGGAAC CGGCAGCGGT
GTTTATATCT CCTCCAACAA CGGAGAAAGC TGGAAGTTGA TCGATTCAGA ATTAACCAAT
ACGATTGTCC TATCTCTTGT CATAAATGGC ACAGATATCC TCGCCGGAAC CAGCAGCGGT
GTTTTTCTTT CTGCCGACAA TGGCACAAGT TGGAGAAGTA TTAATTCGGG TTTGACATCC
GCTAATGTCA ATTCTATAGT CATAAGCGGA GCAAATATCT TTGCCGGAAC TCAGGATGGC
GGTATTTTTC TTTCTACCGA CAATGGTAGT AACTGGAGTC CGGTTAATTC AGGTTTAACA
AACCCTCATA TAAATTCGCT CGCTATAAGC GGCACTACAA TCTTTACCGG ATCATATGGT
GGCGGTGTTT ATCTTTCTGA CAATAACGGA AAGAGCTGGA AGGCTGTTAA TGAGGGCTTA
ACAAACAAGT ACGTCAATTC TATTGCCGTA AGTGGAACGG ATATCTTTTC CGGAACTGAA
GACGGTGTAT TTCTTTCTTC TGACAACGGA AATAGCTGGA GTGGTGTTAG TTCCGATATG
ACAAATAATT ATATTTTTAC TCTTGCCGTA AGTAATACTA ATATCTTCGC TGGAACTAAT
GGCGGGGGTG TTTATCTTTC TACAGACAGC GGCACTCATT GGGATGCTAT TAATTCCGGT
ATGGCAAATA CTCATGTTGG AGCTTTTGCA ATGAATGGTA CCTCTATTTT TGCCGGAACG
AATGGGGCAG GAGTATTTCA CTCTGAGAAC AACGGTGAAA GCTGGAAGGA GATCAACTCC
GGTTTGACGA ACCCTTATGT CTTTTCGATA GCTGTAAGCG GCTCTAATAT CTTTGCTGGA
ACCAATGGCA GGGGTGTTTT TCTCTCCAGC GACAATGGTT ATAGCTGGAG GGAGGTTAAT
TCCGGCTTGA CAAACCAATA CATATATTCT CTTGTCGTCA GTGGCTCTAA TATCTTTGCC
GGAACCTTGG GTGGAGGTGT TTTTCTCTCT ACTAATAATG GTATAAGCTG GTACCCGGTT
AATTCGGGTT TGAACAACAA TTATGTCGGT TCTCTTGTCG TGAGCGGCTC TAATATTTTT
GCCGGAACTT TTGGTGGTGG AGTATTTCTT TCCACCGACA ACGGTGCAAG CTGGAGTGCA
GTCAATTCAG GGTTATCAAA TACTCAGATA TTTTCTCTTG CTATGGACGG AACCAATATT
TATGCAGCAA CTCCTGGCGA TGGTGTTTTT ATATCCACCG ACAACGGTAC AAGTTGGCGA
CCGGTTAATT CAGGTCTGAC AAGCACACAA ATCGATTCTC TAGTCGTCAG GGGCACAACA
ATCTTCGCCG GAACCTATGG CGGCGGAGTT TTTCATTCCA CCAATAATGG CACTAGCTGG
AGTGAGGCTG ATTCAGGATT ATTAAATATT GATGTTTATT CTTTTTGTAT AAGCGATACG
AATGTCTTTG CCGGAACGAA TGGCTGGGGT GTCTGGAAAC GGCCATCAAA TTGA
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| Protein sequence | MKKIYLSLLL VPLLLLAAFL LVPKKTSSAP WIQTNGPYGG YIHCFAIEGK NIYAGTEGGG
IFLSSDGGTS WNEINSGLTN KNVYSLAVGG TNIFAGTGSG VYISSNNGES WKLIDSELTN
TIVLSLVING TDILAGTSSG VFLSADNGTS WRSINSGLTS ANVNSIVISG ANIFAGTQDG
GIFLSTDNGS NWSPVNSGLT NPHINSLAIS GTTIFTGSYG GGVYLSDNNG KSWKAVNEGL
TNKYVNSIAV SGTDIFSGTE DGVFLSSDNG NSWSGVSSDM TNNYIFTLAV SNTNIFAGTN
GGGVYLSTDS GTHWDAINSG MANTHVGAFA MNGTSIFAGT NGAGVFHSEN NGESWKEINS
GLTNPYVFSI AVSGSNIFAG TNGRGVFLSS DNGYSWREVN SGLTNQYIYS LVVSGSNIFA
GTLGGGVFLS TNNGISWYPV NSGLNNNYVG SLVVSGSNIF AGTFGGGVFL STDNGASWSA
VNSGLSNTQI FSLAMDGTNI YAATPGDGVF ISTDNGTSWR PVNSGLTSTQ IDSLVVRGTT
IFAGTYGGGV FHSTNNGTSW SEADSGLLNI DVYSFCISDT NVFAGTNGWG VWKRPSN
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