Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1682 |
Symbol | |
ID | 5741513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 2063482 |
End bp | 2065323 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641292782 |
Product | ABC transporter related |
Protein accession | YP_001558793 |
Protein GI | 160879825 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCATA AAGAAGAATA TAAATTAGGG CAATCTAATC GTAGAAAACA AATGGGACCA CCAGGACCAG GTATGGGCGG CGCTGGTGAG AAAGCCAAAG ACTTTAAAAC AACATGGGTA AAGTTACTTA AGTATTGTAA AAAATATTGG GCAGTTATGG TAATTGCGTT AAGTTGCGTA GTGATGGGTA CTGTATTAAC GTTAATTGGT CCTGACAAAT TATCAGAACT TACTGATTTG ATTACAAAGG GAATTGTTAC TGGAATCGAT TTAGATGGTG TTGCTAGAAT TGGTTGGACA TTGGTAATAT TTTATGGACT TAGTTTTCTG CTGTCATTAA TACAAGGTGT GGTGATGGCT ACGATTACAC AAAATGTATC GAAACAGTTA CGTGGAGATA TTTCTGCTAA GATTAATCGT TTGCCGATGT GGTTTTATAA TAAGACAACA ACAGGAGATG TACTTTCTCG TGTGACGAAT GACGTAGATA CCATTGGGCA ATCTCTAAAT CAAAGTGTGG GGACATTAGT TTCTGCTATT ACTTTATTAG TTGGATCTTT GATTATGATG TTAAAGACAA ATGTATTTAT GACAATTACA GCGATTGTTG CAACTTGTAT TGGATTTGTA TTGATGATGC TTATCATGGG AAAATCACAA AAATACTTTG TACGTCAGCA ACAGCATCTA GGTGAAATCA ATGGACATAT TGAAGAAATT TATGATGGGC ATACCATTGT AAAAGCTTAT AATGGTGAAG CCAAAGCACG AGAGAAATTT GTTTATTTAA ATAATGAACT TCGAGAAAGT AATTTTATGT CTCAATGTTT ATCAGGGTTA ATGATGCCTC TGATGTCGTT TATTGGTAAC TTCGGTTATG TCGCAGTTTG TGTAGTTGGT GCCGTTCTTG TAATGAATAA CACGATTTCC TTTGGAGTAA TCGTGGCTTT TATATTATAT GTAAGATATT TTACACAACC ATTAAGTCAG CTTGCACAAG CTGCCCAGTC TTTGCAATCG GCTGCAGCAG CAGGAGAACG TGTGTTTGAA TTCCTTGAAG CGGAAGAAAT GGAAGATGAG TTGGCAAAGA CAAGAAAGCT TGAAAATGTG CAAGGTAAGG TTGATTTTGA ACATGTAAAT TTTGGCTATG AAGGTTCTGA TAAAGCAATC ATTAATGATT TCTCGGTTTC CACCAAGCCA GGTCAAAAAG TTGCAATTGT TGGCCCAACT GGAGCAGGGA AAACTACCAT TGTAAATCTT TTAATGCGTT TCCATGAAAT ACAAAGTGGA ACTATTAAGA TTGATAATAT TCCTGTTCAT CAGTTACGAC GTGAAGATGT TCATGAACAA TTTTGCATGG TACTTCAAGA TACGTGGATT TTTGAAGGAA CGGTCCGTGA AAATCTAGTA TATAGTACAG AAAATGTTTC TGAGCAAACG TTAGAAGAGG CATGTAAAGC AGTTGGCTTG CATCATTTTA TACGTACGCT TCCACATGGA TATGATACGA TGTTAAATGA TCAATTGAGT CTATCGGCAG GACAAAAACA GCAGCTTACA ATAGCGAGAG CCATGATTGC AGACCGACCA ATGTTAATTC TTGATGAAGC TACAAGTTCT GTAGATACTC GTACTGAGTT AATCATTCAA AATGCTATGG ATGAGTTAAT GAAAGGACGT ACTTCATTTA TTATTGCTCA TAGGCTATCA ACTATTAAAA ATGCGGATTT GATTCTTGTT ATGAAAGATG GTGATATCAT AGAGAGCGGA AACCATAACG AATTAATGAA ACAAGGCGGA TTCTATGCAG ACCTATATAA TAGTCAATTC GATGCGGCGT AA
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Protein sequence | MSHKEEYKLG QSNRRKQMGP PGPGMGGAGE KAKDFKTTWV KLLKYCKKYW AVMVIALSCV VMGTVLTLIG PDKLSELTDL ITKGIVTGID LDGVARIGWT LVIFYGLSFL LSLIQGVVMA TITQNVSKQL RGDISAKINR LPMWFYNKTT TGDVLSRVTN DVDTIGQSLN QSVGTLVSAI TLLVGSLIMM LKTNVFMTIT AIVATCIGFV LMMLIMGKSQ KYFVRQQQHL GEINGHIEEI YDGHTIVKAY NGEAKAREKF VYLNNELRES NFMSQCLSGL MMPLMSFIGN FGYVAVCVVG AVLVMNNTIS FGVIVAFILY VRYFTQPLSQ LAQAAQSLQS AAAAGERVFE FLEAEEMEDE LAKTRKLENV QGKVDFEHVN FGYEGSDKAI INDFSVSTKP GQKVAIVGPT GAGKTTIVNL LMRFHEIQSG TIKIDNIPVH QLRREDVHEQ FCMVLQDTWI FEGTVRENLV YSTENVSEQT LEEACKAVGL HHFIRTLPHG YDTMLNDQLS LSAGQKQQLT IARAMIADRP MLILDEATSS VDTRTELIIQ NAMDELMKGR TSFIIAHRLS TIKNADLILV MKDGDIIESG NHNELMKQGG FYADLYNSQF DAA
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