| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1602 |
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| Symbol | |
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| ID | 5744424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 1977172 |
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| End bp | 1978428 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641292704 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001558715 |
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| Protein GI | 160879747 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGACA AAATTCAGAT GACACTTGCC ACCATGCAAA ATATCTTTAA AGAGCTACTG
TCCGGAAAAC AGTGTGAGCC AATGGAAGAA CCTTCTCAGA TACTAGAACT GCAGAATCTC
TCAAAGCTGA TAAATAAGCT GATTCAAAAT ATGAATGAAA TGAACCGCTT GACAATTGAC
CTTTCACAAG GTAAGCTGGA CGGTCCCCTC CCTTCCCGAT ATAACTACAT GGCTAGCCCA
CTAAAGCAGC TTCACTCCCA ACTATCCATT CTGAAATGGA ACATGTGTCA GCTACAATCA
GGATATGTAG TCAGTAAACT TGAGTATACC GGGGAATTGT TTGATGCCTT TAACGGACTA
ATTGATCAGG TGGTAGCTGC TTCTACACAG GAACGAAACA GCGTCGTTTC CGATATACCT
TCCTTTAACA GTTGGCGTTA TCATCAGATA CTCCAGGCCC TTAATATGCT TCATATTCTG
GTACTTGAAA TAGACAGCAA TGGCCGAGTG ATGTATGCGA ACCACTCGGC AAAGGAAATA
TTAGGTGAAA TGGAATATAT TTCTTCAGAG TGTAGAAAAA GCAAGGTATT AGAGGTTATT
AAAAGATTCA GCAGCGAGGA CTATACCTTC CCTGCTCTTC AGGAGATTTA TGAGAACGGC
AGCAGAACAT GGTACCAGAT CACATCTGAC AGGATTTTGC TTCCCAACGG ACAAATATTA
TACATACATA TGATTGAAAA TGTTAATGAG TGGAAAATTA AAGAAAATCA ATTGATACTG
TCATCAATGA AAGATACGTT GACATCTGCC TATAACCGTA AAACAGGGCT TGAGGAACTG
GAAAATCTCC TAGCCCATAG GGACCCAAGA AAAACACATT GCATATCCTT TATCGATATC
GATAGCTTAA AAACCATCAA TGATACCTAT GGTCACAATG AAGGGGATTA TACAATAAAG
AATATTGCCA AGGTACTTCT CTCAACCGTA CGCGATTCAG ATATCGTCTG CCGGTTTGGC
GGTGATGAAT TTTTTATTAT CTTCAAAAAC TGTTCGGAAG AAGCTGCGAA TAAAATTATC
ATGAGAACGT ACGAGATACT GGACAATATG AACAACAGCA ATAGAAAACC CTACATGCTG
TCCTTTAGTT ACGGTATTGT ACCTTTTTCT TCCGATTCTA CCTATAAGGC TACTGACCTA
CTGGAATTAG CCGATCAAAA GATGTATCAA TATAAAAACA AAAAATTAAA AACTTAA
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| Protein sequence | MDDKIQMTLA TMQNIFKELL SGKQCEPMEE PSQILELQNL SKLINKLIQN MNEMNRLTID
LSQGKLDGPL PSRYNYMASP LKQLHSQLSI LKWNMCQLQS GYVVSKLEYT GELFDAFNGL
IDQVVAASTQ ERNSVVSDIP SFNSWRYHQI LQALNMLHIL VLEIDSNGRV MYANHSAKEI
LGEMEYISSE CRKSKVLEVI KRFSSEDYTF PALQEIYENG SRTWYQITSD RILLPNGQIL
YIHMIENVNE WKIKENQLIL SSMKDTLTSA YNRKTGLEEL ENLLAHRDPR KTHCISFIDI
DSLKTINDTY GHNEGDYTIK NIAKVLLSTV RDSDIVCRFG GDEFFIIFKN CSEEAANKII
MRTYEILDNM NNSNRKPYML SFSYGIVPFS SDSTYKATDL LELADQKMYQ YKNKKLKT
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