| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1555 |
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| Symbol | |
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| ID | 5744377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1907640 |
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| End bp | 1913306 |
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| Gene Length | 5667 bp |
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| Protein Length | 1888 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641292657 |
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| Product | cell wall anchor domain-containing protein |
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| Protein accession | YP_001558668 |
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| Protein GI | 160879700 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4932] Predicted outer membrane protein |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain
[TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTAT TGAAGAATGT AAAGAAAAAG CTATGCTTAT TATTCGTTTT GATGTTGGTT
GTTAATATGA TTAGTAGCAA TATATTAGGA AATACCAGCA TAGTTAATGC AGCGACTGTG
CCAGAAGACT TTCGATTAAC ATCTGTTGCT ATGACAAAAA ACGGAACAGA GATACCGTGG
GATCTGCCAA TTGAGATTGA AGAAAATAAC AGAATTTCTC TTACACTTGC TTGGGAGATT
GATAACGGTG CACCTCTGGT GAATGGAGAC CAGAAGACAA TACCAATACC GGATATATTC
ATACCAGTAG CTAGTACCCA TGGGCCTATG ATGATGGAAA TAGATGGTGA GAATTTAGAG
ATTGGAACGT ATTTAATAGA TAATAATCTT CTTACTCTAA CCTTTAATGA TGTACTAGAG
ACAGGCGGAA GCTATGAGGA TGATCGAAAT GGAGAGATAA TCCTCGATTT TAAAATAGAT
GTAACAAAGT TTAGTGATGA TGCATCTAAA ATAATCGATT TTGGTTATGA AGCATTTCGT
TTCCCGATTA CGGTAAAAAG TCCTTCAACT AAGGGAAGCC ATATAACCAA GAGTGAGACA
CATGAACTTG AGAATCCTTT TTATGTTGAT TGGACAGTTG ATATCAATAC TAGATTGGAC
ATAATACAAG ATGCCTTTTT ATCTGATCAG ATTCCAGAGG GATTATCCTT GATACCTGAT
AAAATTAAGG TAAATAAACT TAAGGTTTCC TATAATGGAA CAGTAACCGG CATAGGTGAG
GATGTGACGG ATTTAGTTCA AGCTGCAAGC GGGACTTCAA TTTCACCAAC TGAGTTTACA
TTAAGTCTTG GTGAGATTAG TGAGGCATAT CGAATTACTT ATCGTACTAA CATAACAGAG
TATGGTAAAA AAGGTTATAC CAATAAAGCT GAATTAAAGA ATGGTACAAT AGCATTAGGT
ACTGATTCTA AGAAAATTCC TAGTTTAATC AGAGGATCTT TGATTGAAAA GTCTGGAGTA
GCTATTAAGT ATGATGGTAC TAATTCTAAA ATAATAGAAT GGACAATTGA TATTAATAAG
GCTGAAATGA ATCTTACTAA TGTACAGTTG GATGATCCTC AGATTACAGC TATCAATCAG
ACAATTAAAA ATAGTACAAT TAAAGTTTGG ATGCTTAATA AGAGCGGAGG AACTTGGAGC
AAAGGTACTG AAGTAACGAA TACCATCAAA GTGCTTAACG GAATAGAAGG TAATGACGAC
TTAGCTTTTC CTATTCAGTT AGGAAATCTT GATAAGAAAG CATATCGGAT TACGTTTGAA
GCAGACATTG ATTATCCTAC GGACTACACA CCAGAAATCA CTTGTACCAA TCAAGCTGAA
TTGACTGCGG ATGGAGAAAT AAAAGAAACA GTAAGTAATT CAGTCAAGGT AACTAGAGGT
GCTCTTCTTA CTAAGGAGAC GACGGGAACT ACCATTAACT ATACTACGAA GGAAATTTCA
TGGAAATTGG TGGCAAATCA AGGAAAACAT ACGATTACAA GTGCTACACT ACATGACAAT
TTACCAGTAG GATTAACCTT AAAGCGTAAC AGTATCAAAA TTAGAATAGG TGGTGTCGAT
AGAAGCTTAT CAGAATTCAG TGTAACTCCT CCTAATGGTG ATATCACTGG TAGTGCAGCT
AATCCGGAAT TCACGATAAA TTTTGGTAAC ATTAGTGATG TTGTAATTAT TGAATATGTT
ACAGAAATTA ATGACCCAGA GCTTTATGGT GAAAAATTTA ATAATGAAGC ATGGCTCACC
GGAGGTGGAA TTGGCACTGG AAGCGGTCCT GGTAGTGGTT ATGGGGGCTA TTATGAACCT
ATAAAGAAAG ATACTACTCC AAATATTCAG AATTACTTTA CGAAACTAAA AGTAGGTAGC
TTATCATCAT CAAAAAAAGT TGACGGGGTA ACTTATGATG GTCTGAATTA TGAAACGAAG
ACTATGAGCT GGAAATTTGA AATCAAACCT ATTAAGGAAG GAATTACGGC GTTAGTAATA
GAAGATACCT TCCCTAATAA AGGGCAATAC TTTTTAAAAG ACACTTTGAG GTTTGAAAAG
CAAGACGGAT CTTTATTAGC GCTGGGAACC GATTATACGA TTAGTGACCT TGATGGCACA
GATGTGAATT ATCAGAATGG TTTCAAATTA GTATTAAATG CAGGTGTTAC TCTTAAGGAC
CAGGATTATT ATATTTACTA TAAAACAAGC TTTAATAAGA ATGAACATCC TGAAATTATA
GCAAATCCTT TAGAAGTAAA TAGTGGAAAT GCTGTTTACA ATAATAAAGC TAGCTTTACT
TATATCCCGG AGAATAAAAC TAAAAGAACA TCTCCATTTG AATCTACAGC TTACTACGAC
GTGAGCTATA TTACCCACAA CCAAGGTGAC AAAAAAAGTA AAGGTTTTAG TCTTCAGGAT
AGATGGATTA GTTGGGAGAT ACTTGCTAAC CATCAAGGAA GAACAATAAG TGGAAGCGAG
CTTGTAGTTA CTGATAAATT CTCAGAAGGT CAGGAACTTG ACGAAGATTC CATACAAGTA
ATCCAATATA AGGTAATTGC TGATGGTACT CGTGAAGATG TTAAAACCCT AAATAAGGGA
ACGGACTATA CGGTTGAGAA AGATTCCGAT GATCTTGGTT TTACTGTGAA AATTGGAGGA
ACTGGTAGGA ATAATCCACA TCGAATCGTG TATAAAACTA AGATCGTCGG ATTATCAAAA
CAAGAATACA CTAACACTGC AACGATTGAA GGGATTTCTT ATAGTGATAA GGTAACAAAC
CCAAAATATG ATAAGTTCCT AAGTAAAACC ACAGTGGATG ATAAAATTAC AACAGCTTAT
CAGGATGACG AAATTCAATG GAAAGTAGTT CTTAATGAGA GTCTTTCTGA AGTTAAGAAT
GCTAAGTATG TGGATAAGAT TAGCGGTGGT CATGCGTATG TGATCGATAG TCTTAAGGTA
TATGAGATTG ACCGTAACAA CGGAGGGAAA AAGCTAGAGC CAGCCCTAGT GGAGGGCCCG
ACAACTTATT CCTTAGATGC CGTAAAAGAT CCAGACACTA AAAATTGGAC CCTAACCCTT
ACATTTAATC AAGACATCCA TAAACAATAT CAGATTGAGT ATTCAACTGT TGTAACCGGA
GGGACAGGAA GTATTGTTAA TGCCGCTACA TTTGAGGGAA CAGAAGTTTC TTCTAGCGAT
TCAGGTGCAC ATGAAACAAA GACTTTCAAT ATATCTCAAT CTTCCTCTGC TACAGGTACT
GGTAGCAGCT CTAGAGGAAG TATAAGGATA GAAAAGGTGG ATTTAGCTAC AGGAAGGATA
ATTACCGATA CTCCGGCAAA GTTTGAACTA TATTACTTGC TAAATGGCGA TCCGATTATT
GTTGGTGAAT CAGCGAAGGA AACTATTAAC GGTGTGTTAA TCTATGACTC TGTACCTATC
AATAGAGATT ATTACCTTAA AGAAATAGAG GCTCCAGAAG GATATCTTAT TGATGACACA
CTTCAACCAA TGATAATTAA AAATGGTTCT ATAATAAAAA ATAATACATT TACTGTTCAA
GTAAAGAATG AGAAGATAGA AAAAGAATTA AGAATTACCA AAGTAGATAT GGATAATTCA
GCCTTAAAAC TTTCTGGAGC TGAATTTAGA TTATACCAAA TATCATCCTC AGACCCTCTC
GTAAGAACAC AAGTGGGTGG AGTTTACACA ACGGATGGCA GTGGCATGGT AACCATAGGC
GGTCTAAAAG ATGGTGACTA CGAGTTAGAG GAAATTACAG CACCAGCAAA TTATCAGTTA
CCAGTGAATC GTATTACCAA AGTCACAATT AGTAAAGAAA AGGACTATGA AGATTTGGTA
AAGGATAACA TAGTAAACTA TACCGTTGCC AATGAGAAAC AGTTAGCACT TGATATCACA
AAGGTAGATT ATGATGATAG CAGTAAAGGT TTAGCTGGGA CTGAGTTTAA GTTATATCGA
ATTGATATTA CTCCTGAAGT GCAAATCGGT GGAATCTATT CGACAGGAAC TGATGGTAAA
TTGCTAATTA CAGGATTAGA CAATGGAACC TACCGCCTAG TTGAAACAAA AGCTTCTTGG
GGATATCAGT TACCTGAAAA TCCGAGAACA GTGATTATTG TTAATGCAGC ACACGATATT
TCATCGGATG GTGTAAAGGA TTATGTCATT ACTGTAGATA ACATAGTGAA TAAGAAACTA
AAATCAGTAA TAGTAAAAAA AGTGAGTGCA GAAAATCCAA GCCTTGGACT TGAAGGTGCA
GAGTTTAAAC TTTATGATGC TTCTAATAAT CAAATCGGAG GAACGTATAG AACGGATGAA
TTTGGTGAGT TTATAATACA TGATTTGGAA GTTGGAGTTT ACAGACTCGT GGAAACAAAA
GCTCCAGCAG GATATTTTCT TCCAGAGCCT GCTCTAAGAG AAACTCCTAT TATCATTACT
CATCATACGG ACTATGACTA TATTCTTCCG GGAATTACGA ACCAAATGCT TAGAACTATT
AAAATAGTAA AGATTGATGA AGATAGTCTG AATCCATTAG AAGGAGCAAA GTTTGATGTT
TATAAGGATG GTATTAAAGT TGGAACTTTG ACTACTGATG AAAATGGTGA GGCTGAAATC
GATGGACTGT TATTAGGTGA GTATAGAATA GCTGAAACAA CTCCACCGAC AGGATATCAG
TTGCCAGTAG ATCCTAACAC TACAGTAAGT TTAATGGCAG GTGCAGCAGC TACAGTAACA
GAAACTATCA CCAATAACAA GTATAGAACT CTTGAAATTA CTAAGGTAGA TGCCAATGAC
AGTGGATTAC TCCTAGAGAA TGTCGGTTTT GAACTTTATG ATTCAAAAGG TCAGCTTGTT
GGAAGAGGTG AAACAGATAA ATTGGGTAAT CTTACCTTTG AAAATTTGGT ATTTGGTACC
TATACCCTAA AAGAAGTAAA ATCTCCTGCT GGGTATCAGT CAATTAGCAA ACCGATTGAG
ATAGTCCTGG ATAGAACTTC CCCGCTTCTA TACGAGCTGA CAGTTAAAAA CAACAAGATA
CAGGTAATAC CGGAAGTTCC TGTTTCTCCT GGAACAGGTA CTCCGACGCC TACGCCAGAA
CCAACAAAGC CAGTAACTCC AACACCAACA CCGAAGCCAG TAAAACCAGT AACACCAACG
CCGACTCCAA AGCCAGCAAA GCCAGTAACA CCGACACCGA CTCCGAAGCC TGAGACTGAA
GAGAAGGTTA CTACCCCTAA GGAAGAACCA AAAGAAGGTA AAGTTCCTGT TCCAGATAAA
GGGAAGCCTA AGGTTACTGA GAAACCTAAG CATGGTAAGG TAACAGTGGA TGAAAAAGGT
AAGTGGATTT ATACTCCTAA AAAAGGATAC ACCGGTAAGG ATAAGTTTGT AATAAAGGTT
ATTGATGGAG ATGGAAAAGA AGAGGATTTC TTCTTTAATG TTGATGTCGA AGATGTGCCT
TTAGGTAATA TTGACGTAGA TCATAAAGAG AAGGATAAGG GTGTTAAAGA ACTTCCAAAA
ACAGGTGAAA CTGGCATCCA GATTGAGTTT TTATTAGGTT CCGTATTGAT AATACTTGGA
GCTGTTATTA GAAAAAAAAC TAAATAA
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| Protein sequence | MALLKNVKKK LCLLFVLMLV VNMISSNILG NTSIVNAATV PEDFRLTSVA MTKNGTEIPW
DLPIEIEENN RISLTLAWEI DNGAPLVNGD QKTIPIPDIF IPVASTHGPM MMEIDGENLE
IGTYLIDNNL LTLTFNDVLE TGGSYEDDRN GEIILDFKID VTKFSDDASK IIDFGYEAFR
FPITVKSPST KGSHITKSET HELENPFYVD WTVDINTRLD IIQDAFLSDQ IPEGLSLIPD
KIKVNKLKVS YNGTVTGIGE DVTDLVQAAS GTSISPTEFT LSLGEISEAY RITYRTNITE
YGKKGYTNKA ELKNGTIALG TDSKKIPSLI RGSLIEKSGV AIKYDGTNSK IIEWTIDINK
AEMNLTNVQL DDPQITAINQ TIKNSTIKVW MLNKSGGTWS KGTEVTNTIK VLNGIEGNDD
LAFPIQLGNL DKKAYRITFE ADIDYPTDYT PEITCTNQAE LTADGEIKET VSNSVKVTRG
ALLTKETTGT TINYTTKEIS WKLVANQGKH TITSATLHDN LPVGLTLKRN SIKIRIGGVD
RSLSEFSVTP PNGDITGSAA NPEFTINFGN ISDVVIIEYV TEINDPELYG EKFNNEAWLT
GGGIGTGSGP GSGYGGYYEP IKKDTTPNIQ NYFTKLKVGS LSSSKKVDGV TYDGLNYETK
TMSWKFEIKP IKEGITALVI EDTFPNKGQY FLKDTLRFEK QDGSLLALGT DYTISDLDGT
DVNYQNGFKL VLNAGVTLKD QDYYIYYKTS FNKNEHPEII ANPLEVNSGN AVYNNKASFT
YIPENKTKRT SPFESTAYYD VSYITHNQGD KKSKGFSLQD RWISWEILAN HQGRTISGSE
LVVTDKFSEG QELDEDSIQV IQYKVIADGT REDVKTLNKG TDYTVEKDSD DLGFTVKIGG
TGRNNPHRIV YKTKIVGLSK QEYTNTATIE GISYSDKVTN PKYDKFLSKT TVDDKITTAY
QDDEIQWKVV LNESLSEVKN AKYVDKISGG HAYVIDSLKV YEIDRNNGGK KLEPALVEGP
TTYSLDAVKD PDTKNWTLTL TFNQDIHKQY QIEYSTVVTG GTGSIVNAAT FEGTEVSSSD
SGAHETKTFN ISQSSSATGT GSSSRGSIRI EKVDLATGRI ITDTPAKFEL YYLLNGDPII
VGESAKETIN GVLIYDSVPI NRDYYLKEIE APEGYLIDDT LQPMIIKNGS IIKNNTFTVQ
VKNEKIEKEL RITKVDMDNS ALKLSGAEFR LYQISSSDPL VRTQVGGVYT TDGSGMVTIG
GLKDGDYELE EITAPANYQL PVNRITKVTI SKEKDYEDLV KDNIVNYTVA NEKQLALDIT
KVDYDDSSKG LAGTEFKLYR IDITPEVQIG GIYSTGTDGK LLITGLDNGT YRLVETKASW
GYQLPENPRT VIIVNAAHDI SSDGVKDYVI TVDNIVNKKL KSVIVKKVSA ENPSLGLEGA
EFKLYDASNN QIGGTYRTDE FGEFIIHDLE VGVYRLVETK APAGYFLPEP ALRETPIIIT
HHTDYDYILP GITNQMLRTI KIVKIDEDSL NPLEGAKFDV YKDGIKVGTL TTDENGEAEI
DGLLLGEYRI AETTPPTGYQ LPVDPNTTVS LMAGAAATVT ETITNNKYRT LEITKVDAND
SGLLLENVGF ELYDSKGQLV GRGETDKLGN LTFENLVFGT YTLKEVKSPA GYQSISKPIE
IVLDRTSPLL YELTVKNNKI QVIPEVPVSP GTGTPTPTPE PTKPVTPTPT PKPVKPVTPT
PTPKPAKPVT PTPTPKPETE EKVTTPKEEP KEGKVPVPDK GKPKVTEKPK HGKVTVDEKG
KWIYTPKKGY TGKDKFVIKV IDGDGKEEDF FFNVDVEDVP LGNIDVDHKE KDKGVKELPK
TGETGIQIEF LLGSVLIILG AVIRKKTK
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