| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1506 |
|---|
| Symbol | |
|---|
| ID | 5744328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1854463 |
|---|
| End bp | 1855635 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641292608 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001558619 |
|---|
| Protein GI | 160879651 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4923] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGGCT ACAACTGTAT TATGGTATTT CATCAAAATG GTGACTTACT ATTCTGTAAA
AGAAGAAAAG ATCCCTACTT AGGATTCTAT AATCTTGTAG GGGGTAAAAT TGAAGCAGGG
GAAGATGGAT TTGATGCTGC TTATCGTGAG TTATATGAAG AAACCGGGAT TTCTCCTAAG
GACATTAAGC TTCAACATAT GATGGACTTC ACATATTATA ATCAGGATTG TTATGTTGAG
GTGTATGTTG GACATTTACA AGGAGAAGTC GTTTTACAGG AGGAAGATCA TCCGCTAGAA
TGGTTGGATA TGGGGGAAGA CTTTTTTGAT TGCAGCAGAT TTGCAGGAGA AGGAAATATC
GGTCATATGG TTGAGCAGGT TAAACTATAT GGTACCGGAA AATCTAGGAT TTCTATAAAT
ACAAATGATA AAGAGATAAA TGATAAAAAG ATTAATCTTA ATAGTATATG TATTGGTGTA
GATGGTTGTA AAGGCGGATG GATTACAGCC ATAATAAAAC AAGGTAAGTT AATTTTAGAA
AAATATTCGA ACCTTGAAGA CATAGTATTA AACAATGGAA CATTTGATGA ATTTCTAATT
GATATGGTGA TTGGTTTACC TAGTACAAGT GAGCAGATTA GACCAGATAC GGAAGCAAGA
AAGCAGATTA AGGAAAGGTC ATCAACAATT TTTCCAGCAC CATGTAGACA AGCTGTTTAT
GCTGAGGATA TATCTAAGTC TTACGATGAA AATGTAAGGG TATTAGGCAA AAAATTTACC
CCACTGACAG TTGGAATTAT ACCCAAAATG CGAGAAGTTG ATAGTTTTCT TCAAGAAAAT
AATCAGTATA AGAACGTAAT TAAAGAAAGC CATCCAGAAG TTTGCTTTGC AAGATTAAAC
GGTAGTACAG TATTATCTAA GAAATCGGAA ATAGACGGGG TAGAAGAGAG AATAGGGATA
CTATCGAAGT TCATAGATGA GATAAGTTTT GAAAAAATTA AAATATGTGC GAAAGAATTT
AAATGTAATG TGGATGATAT TATCGATGCA ATTTGTCTTT CCGTTTCTGC AAATTTCGTT
AATCAGGGTG AATATATAGT GATCCCAGAG AAGCCGATGG TTGATGAAAC AGGACTATTA
ATGCAGATGG TAGTACCGAA TAAGTTTGGA TGA
|
|---|
| Protein sequence | MQGYNCIMVF HQNGDLLFCK RRKDPYLGFY NLVGGKIEAG EDGFDAAYRE LYEETGISPK
DIKLQHMMDF TYYNQDCYVE VYVGHLQGEV VLQEEDHPLE WLDMGEDFFD CSRFAGEGNI
GHMVEQVKLY GTGKSRISIN TNDKEINDKK INLNSICIGV DGCKGGWITA IIKQGKLILE
KYSNLEDIVL NNGTFDEFLI DMVIGLPSTS EQIRPDTEAR KQIKERSSTI FPAPCRQAVY
AEDISKSYDE NVRVLGKKFT PLTVGIIPKM REVDSFLQEN NQYKNVIKES HPEVCFARLN
GSTVLSKKSE IDGVEERIGI LSKFIDEISF EKIKICAKEF KCNVDDIIDA ICLSVSANFV
NQGEYIVIPE KPMVDETGLL MQMVVPNKFG
|
|---|
| |