Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1487 |
Symbol | |
ID | 5742437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1831098 |
End bp | 1831769 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641292589 |
Product | SirA family protein |
Protein accession | YP_001558600 |
Protein GI | 160879632 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0425] Predicted redox protein, regulator of disulfide bond formation |
TIGRFAM ID | [TIGR03527] selenium metabolism protein YedF |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA CGATTGATGC AAGAGGATTG CAGTGTCCTC TTCCAGTTAT AGAGACAAAA AAAGTATTAA AAGAGCTTAC AGATGGTATG GTTGAAATTT TTGTAGATAA CGAGATTGCT GTTCAAAATC TAACAAAGAT GGCAAAACAA ATGAAACTTA ATTACTCTTC TGAAAAAATT GCGAATGATC ACTATGCTGT AAGAATTGAA ATAGTAGATC AAGCAAAAGA AGGTGTAAAT CAAAACAGTA ACTCTAGAGA AAACATTCAG AGTAACTCTA GCCAAGATGT TACGTTAGTT TCTACAACAG ACCAATGCAA CCCAGATACC AGAGAAGAAT CTACTATTAT TGTATTGTCC ACGGATCATA TGGGAGAAGG GAATGAGCAA CTTGGTAAAA CCTTAATGAA AGGCTTTATT TATGCGCTTA CAGAACTAGA TAAGCTCCCA GAGAAGGTTA TACTTTATAA TGGCGGGGCG AAACTACCGG TAGAAGGCTC AGATTCTTTA GAAGACTTAA AACTATTAGA AGCTCAAGGC GTTGAAATAT TAACCTGTGG AACTTGTCTG AACTTCTATG AAATATCCGA TAAATTATCC GTTGGTTCAG TGACCAATAT GTACGCGATT GCAGAGATAA TGATGAATGC ATCAAAGATA ATTAAGCCTT AA
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Protein sequence | MKKTIDARGL QCPLPVIETK KVLKELTDGM VEIFVDNEIA VQNLTKMAKQ MKLNYSSEKI ANDHYAVRIE IVDQAKEGVN QNSNSRENIQ SNSSQDVTLV STTDQCNPDT REESTIIVLS TDHMGEGNEQ LGKTLMKGFI YALTELDKLP EKVILYNGGA KLPVEGSDSL EDLKLLEAQG VEILTCGTCL NFYEISDKLS VGSVTNMYAI AEIMMNASKI IKP
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