Gene Cphy_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1458 
Symbol 
ID5742408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand- 
Start bp1799557 
End bp1800042 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content35% 
IMG OID641292560 
ProductMerR family transcriptional regulator 
Protein accessionYP_001558571 
Protein GI160879603 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0168574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATGA AATCAGTTAA TTTTACAGAA ATGAGCTTTA AAATTGGGGA AGTAGCCGCT 
ATGTTCGATA TATCAACAAA AACATTACGT ATATACGACC GAATTGGTTT GCTGAAGCCC 
TCCAGTATTG ATGGTGAAAG CGGTTACCGA TATTATAGTC CGAATCAGAT AAGTCGTCTG 
GAAGTAATTT TAAATCTAAA AAGAGTTGGC TTTTCCTTGA GTGAAATATC CCTGTTTGTC 
AATGGGGACA TCAGTAATAA TGAAATAGCA ACTATATTTC GTAAAAAGCA TACACAACTC 
CAAAGTATGG TAGATTCTTT AGAATATAAT ATGGAGCTAA TTGAAGATAT GATATCCTCC 
TTGAAACAAG GAACGCTAAT TCAAGACAAG CTTACAGAAC AGGAAAGGGC TATTCTTTTA 
TCTAGAGTAA CCTGCTTGGA AAATGCAAAA CTAGAAGAAT CTCTTACACA GATTTTATGG 
CTGTAG
 
Protein sequence
MDMKSVNFTE MSFKIGEVAA MFDISTKTLR IYDRIGLLKP SSIDGESGYR YYSPNQISRL 
EVILNLKRVG FSLSEISLFV NGDISNNEIA TIFRKKHTQL QSMVDSLEYN MELIEDMISS 
LKQGTLIQDK LTEQERAILL SRVTCLENAK LEESLTQILW L