| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1410 |
|---|
| Symbol | |
|---|
| ID | 5742360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1750400 |
|---|
| End bp | 1751233 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641292513 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_001558524 |
|---|
| Protein GI | 160879556 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGAAA AGAAATTATA TTCTATAGGT GAAGTCAGTA AGAGTTGCAA TATTTCAACA
AAAGCTTTAA GGTTTTATGA TAAAATGGGT ATCATCTCAC CGGACGTAAT TTGTAAAGAA
AACAGCTATC GGTACTATAA CAAAGAGTCT CTTTTAACCG TTCCGATAGT TAAATATTAC
AAGCAGATGG GATTTAAACT TGAGGAGATG CAGGGGTTAG TGGAGGGAAA TACCTATTTC
TATCTTGAAC ATAACTTCCG CAACAAGATC GATCAGTTAC GCCTACAAGA GCAACAGATT
CATAACAGCT ATATTGCAGT AAAAGATTGG TACGAGCTTA TACAGGAGGC CAAGATGGTT
CTGCAGAATG ATGTTCATGA TGTTTCCGTA AAGTATATGC AGCCTACAAC CTACTGTGGG
ATGGATCAGG ATTTTGATTA TCAATATATG GAATCCATCA TTAATTTAGA ATGGACGAGC
CACTTAGAAA AAGCTAATAA TGAGATTACA GGACCAGTAA TATTGAAATT TGATTCCTTT
GAGGAAAAGA TGGCAGGAAG GTGCAAACGG ACTAGAATCA TGCAGGAGGC TATCTATCCA
TGTAAGGGCT GCAAGAATCG ACAAGTTTTT GGTGGAGTCA TGGTTGCATC AGTTTATCAT
ATTGGAAAGC TTGAGAATAT CGATGAAGAA TATGAGAAAA TCCTAAACTG GGCCGCTAAA
AAAGGTTATA AATGCGGTAA GGAAAGCTAT GAACGATATG TGGTGGATTA CTGGACTACC
AGAAACTTGG ATGAATTTGT TACAGAGATA ATGGTCCCTG TAAACAGGGA GTAA
|
|---|
| Protein sequence | MEEKKLYSIG EVSKSCNIST KALRFYDKMG IISPDVICKE NSYRYYNKES LLTVPIVKYY
KQMGFKLEEM QGLVEGNTYF YLEHNFRNKI DQLRLQEQQI HNSYIAVKDW YELIQEAKMV
LQNDVHDVSV KYMQPTTYCG MDQDFDYQYM ESIINLEWTS HLEKANNEIT GPVILKFDSF
EEKMAGRCKR TRIMQEAIYP CKGCKNRQVF GGVMVASVYH IGKLENIDEE YEKILNWAAK
KGYKCGKESY ERYVVDYWTT RNLDEFVTEI MVPVNRE
|
|---|
| |