| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1287 |
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| Symbol | |
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| ID | 5744893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1615659 |
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| End bp | 1616342 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641292393 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001558404 |
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| Protein GI | 160879436 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0339445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTAT TATTTTTAGA AGATGAACCT GTGATTCAAG ATGTGTTAGC GGAATATATG
AGGATGAAAA ATTATGATGT AGTGACAGTA AGCGATGGTG AAGCCGCCAT CGCTACTCTT
TCGAGAGAAG ACTTTGATAT CGCTGTTCTA GATATTATGG TACCTAAGAA AAATGGCTTA
TTTGTCCTAG AGTATATTAA AGAACGAGGA ATCGATCTTC CTTGTATCAT GCTGACTGCA
CTAGAAGATG AGCAGACACA GTTAAAAGCA TTTAATTTAT ATGCCGATGA CTATGTTATA
AAGCCGGTTT CTCCGATTAT TTTATTAAAG AGAATGGAAA CCATTTTACG TAGAGTTTCT
AGTTATAAAA CCAAACCAAT GAATAATAAA GAATTTTATT TACTTGAGGA TTCCTATCAG
GCATTTTTTC AAGGAGAATC CTTGAATTTA ACCTTAAGTG AATTTTTACT TTTGCAGATG
CTATGGAAAG AGCCAAATAG AGTATTTACT AGAGAACAAA TAATTCTACA TATCTTTAAT
GAAGATTATA TTGGTAATGA TCGAATTATT GATGCCCATG TGAAAAACTT AAGAAAAAAG
TTACCGTTTT ACTGTATTCG TACCGTGATT GGAGTAGGTT ACCAATTTGA TATCGCTCAG
TTAGAGAATG GGGTGAAAAG TTGA
|
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| Protein sequence | MKVLFLEDEP VIQDVLAEYM RMKNYDVVTV SDGEAAIATL SREDFDIAVL DIMVPKKNGL
FVLEYIKERG IDLPCIMLTA LEDEQTQLKA FNLYADDYVI KPVSPIILLK RMETILRRVS
SYKTKPMNNK EFYLLEDSYQ AFFQGESLNL TLSEFLLLQM LWKEPNRVFT REQIILHIFN
EDYIGNDRII DAHVKNLRKK LPFYCIRTVI GVGYQFDIAQ LENGVKS
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