Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1252 |
Symbol | |
ID | 5744858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1581246 |
End bp | 1582583 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641292358 |
Product | MATE efflux family protein |
Protein accession | YP_001558369 |
Protein GI | 160879401 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000131388 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTACTA AAAAAAATCT TATCAAGTTA TTGGTTCCAC TTGTTATTGA ACAGCTGCTT GCAGTAACGG TTGGTATGGC AGATACCATA ATGATTGCAA AAAGGGGAGA GGAGGCTGTT TCAGGAATCT CTGCGGTGGA TGCAATCTGT GTGCTTTTAA TAGGACTGTT CTCAGCCTTA GCAACGGGTG GTGCTGTCGT GGCGGCACAG TTTATTGGGC AAAAAAACAG AGAGAAAGCC AATGAGGCTG CTAACCAGTT AGTGCTATCT GTAGCATTTT TATCGGTTAT TTTAATGGTT ATTTCTTTGA TTGGAAATGA AGCAATTTTA CATCTGATTT ATGGTAAATT AAGTCCACTG ACGATGCAAA ATGCGAAAAC ATATTTTTAT ATTGTAGCAG TATCATTCCC ATTTATTGCG ATATATAATG CAGGAGCTGC ATTGTTTCGT GCAATGGGGA ATTCTAAGAT ATCTATGATG ACATCCCTTT GGATGAATAT CATTAATATA GTAGGAAATT CTATCCTCAT CTTTGGATTT GGTATGGGAG TAGCAGGAGC AGCTATCTCA ACCTTATTAT CACGTATGAT TGCTGCTATT ATAGTTATTT ATCGTTTACG GAATCAAGAA AATGCCATAT GTATCGAATA TAATTTTCGC TTAGGCTACC AACCGGAGAT GATTCGGCGA ATCCTAAAAA TTGGTATTCC AAATGGTTTA GAGAACAGTA TTTTTCAGTT TGGTAAGCTT TTGGTAGGCA GTTTGATTGC CACGTATGGT GAGGTTGGAA TGACAGCGAA TGCTATTGGT AACTCTGTAG CATCGTTTAA TTGCATCCCA GGTAGTGCGA TTGGATTAGC AATGATTACT GTAGTTGGCC AATGTGTAGG AGCAGGAAAG CTTGATGAAG CAAAGAAGTA CACATGGAAG CTTTTAAAAT ATGCAAGTAT TTCAATGTTA GTGCTCAATA TCATCGTATT GTTAAGTATC AACCCAATTG TAAATTTATT TGAGGCTCAA GCAGCTACAA AAGAGCTTGC AACGAAGTTA CTTATTTATC ATTGTATCTG TTGTATTATC ATTTGGCCTT CTGCATTTAC TCTTCCTAAT GCATTAAGAG CTGCAAATGA TGTGAAGTAT ACGATGTTTA CTTCCATTTC GTCGATGTGG ATTTTCCGCG TTGGTTTTAG TTTTGTATTA GCTCAAACTT TTGGTCTTGG TGTGTTCGGT GTTTGGGTAG CGATGACGAT CGACTGGGTA TTCCGTGCAA TCTTATTCCT TAGTCGTATG ATTAGTGGCG GATGGAAAAA ACATGCACGA ATGGAGCATG CGCGTTAA
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Protein sequence | MFTKKNLIKL LVPLVIEQLL AVTVGMADTI MIAKRGEEAV SGISAVDAIC VLLIGLFSAL ATGGAVVAAQ FIGQKNREKA NEAANQLVLS VAFLSVILMV ISLIGNEAIL HLIYGKLSPL TMQNAKTYFY IVAVSFPFIA IYNAGAALFR AMGNSKISMM TSLWMNIINI VGNSILIFGF GMGVAGAAIS TLLSRMIAAI IVIYRLRNQE NAICIEYNFR LGYQPEMIRR ILKIGIPNGL ENSIFQFGKL LVGSLIATYG EVGMTANAIG NSVASFNCIP GSAIGLAMIT VVGQCVGAGK LDEAKKYTWK LLKYASISML VLNIIVLLSI NPIVNLFEAQ AATKELATKL LIYHCICCII IWPSAFTLPN ALRAANDVKY TMFTSISSMW IFRVGFSFVL AQTFGLGVFG VWVAMTIDWV FRAILFLSRM ISGGWKKHAR MEHAR
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