| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1252 |
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| Symbol | |
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| ID | 5744858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1581246 |
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| End bp | 1582583 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641292358 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001558369 |
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| Protein GI | 160879401 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000131388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTACTA AAAAAAATCT TATCAAGTTA TTGGTTCCAC TTGTTATTGA ACAGCTGCTT
GCAGTAACGG TTGGTATGGC AGATACCATA ATGATTGCAA AAAGGGGAGA GGAGGCTGTT
TCAGGAATCT CTGCGGTGGA TGCAATCTGT GTGCTTTTAA TAGGACTGTT CTCAGCCTTA
GCAACGGGTG GTGCTGTCGT GGCGGCACAG TTTATTGGGC AAAAAAACAG AGAGAAAGCC
AATGAGGCTG CTAACCAGTT AGTGCTATCT GTAGCATTTT TATCGGTTAT TTTAATGGTT
ATTTCTTTGA TTGGAAATGA AGCAATTTTA CATCTGATTT ATGGTAAATT AAGTCCACTG
ACGATGCAAA ATGCGAAAAC ATATTTTTAT ATTGTAGCAG TATCATTCCC ATTTATTGCG
ATATATAATG CAGGAGCTGC ATTGTTTCGT GCAATGGGGA ATTCTAAGAT ATCTATGATG
ACATCCCTTT GGATGAATAT CATTAATATA GTAGGAAATT CTATCCTCAT CTTTGGATTT
GGTATGGGAG TAGCAGGAGC AGCTATCTCA ACCTTATTAT CACGTATGAT TGCTGCTATT
ATAGTTATTT ATCGTTTACG GAATCAAGAA AATGCCATAT GTATCGAATA TAATTTTCGC
TTAGGCTACC AACCGGAGAT GATTCGGCGA ATCCTAAAAA TTGGTATTCC AAATGGTTTA
GAGAACAGTA TTTTTCAGTT TGGTAAGCTT TTGGTAGGCA GTTTGATTGC CACGTATGGT
GAGGTTGGAA TGACAGCGAA TGCTATTGGT AACTCTGTAG CATCGTTTAA TTGCATCCCA
GGTAGTGCGA TTGGATTAGC AATGATTACT GTAGTTGGCC AATGTGTAGG AGCAGGAAAG
CTTGATGAAG CAAAGAAGTA CACATGGAAG CTTTTAAAAT ATGCAAGTAT TTCAATGTTA
GTGCTCAATA TCATCGTATT GTTAAGTATC AACCCAATTG TAAATTTATT TGAGGCTCAA
GCAGCTACAA AAGAGCTTGC AACGAAGTTA CTTATTTATC ATTGTATCTG TTGTATTATC
ATTTGGCCTT CTGCATTTAC TCTTCCTAAT GCATTAAGAG CTGCAAATGA TGTGAAGTAT
ACGATGTTTA CTTCCATTTC GTCGATGTGG ATTTTCCGCG TTGGTTTTAG TTTTGTATTA
GCTCAAACTT TTGGTCTTGG TGTGTTCGGT GTTTGGGTAG CGATGACGAT CGACTGGGTA
TTCCGTGCAA TCTTATTCCT TAGTCGTATG ATTAGTGGCG GATGGAAAAA ACATGCACGA
ATGGAGCATG CGCGTTAA
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| Protein sequence | MFTKKNLIKL LVPLVIEQLL AVTVGMADTI MIAKRGEEAV SGISAVDAIC VLLIGLFSAL
ATGGAVVAAQ FIGQKNREKA NEAANQLVLS VAFLSVILMV ISLIGNEAIL HLIYGKLSPL
TMQNAKTYFY IVAVSFPFIA IYNAGAALFR AMGNSKISMM TSLWMNIINI VGNSILIFGF
GMGVAGAAIS TLLSRMIAAI IVIYRLRNQE NAICIEYNFR LGYQPEMIRR ILKIGIPNGL
ENSIFQFGKL LVGSLIATYG EVGMTANAIG NSVASFNCIP GSAIGLAMIT VVGQCVGAGK
LDEAKKYTWK LLKYASISML VLNIIVLLSI NPIVNLFEAQ AATKELATKL LIYHCICCII
IWPSAFTLPN ALRAANDVKY TMFTSISSMW IFRVGFSFVL AQTFGLGVFG VWVAMTIDWV
FRAILFLSRM ISGGWKKHAR MEHAR
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