Gene Cphy_1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1231 
Symbol 
ID5744836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1554697 
End bp1555377 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content37% 
IMG OID641292336 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001558348 
Protein GI160879380 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGAGC TTCTTGAAAA ATATCTACCA AATGTAATGT CGAAGCTACC TGACTTTTAT 
AAAAGTATTT CTGAAACGCT ACAGATGGTT TTAAAAGCAG GAATCGTGAT TTTTATTATT
GGATTGTTAA TAGGAATTAT CCTAACTGTA ACAAAAAAGG ATGGAATACT TCAAAATCTA
GCAATTTATC AGGTTCTTGA TAAGGTAGTC AATTTCTTTC GCTCCATTCC GTTTATTATT
TTACTTGCAG GTCTGATTCC TCTTACAAGA TTGATATCTG GAACAGCAAT CGGAGTGAAA
GGAGCAATCG TTCCATTGAT TTTTGGTACA GCACCATTCT TCTCAAGGCA AGTAGAAACT
GCTCTAGCAG AAATGAATCC AGGACTAATT GAAGCTGCGC AAGCGATGGG AAGTGGTCCG
ATTGAAATCA TTTTTCGAGT ACTATTAAAG GAATGTATTC CCGGATTAGT CAGAGCAACA
ACCATAACAG CGATTAACTT AATTAGTTTA ACTGCAATGG CTGGAGCTAT TGGTGCGGGG
GGGCTTGGCG ATTTTGCAAT CAGATTTGGT TATCAACGTA ATCAAACGGA TGTAACTTAC
GCATCAGTGG TTGTTTTAGT GCTACTGGTA AGCGTTATTC AAATTGTTGG TAACGTGGTA
TCAAGAAAAT GTACACATTA G
 
Protein sequence
MQELLEKYLP NVMSKLPDFY KSISETLQMV LKAGIVIFII GLLIGIILTV TKKDGILQNL 
AIYQVLDKVV NFFRSIPFII LLAGLIPLTR LISGTAIGVK GAIVPLIFGT APFFSRQVET
ALAEMNPGLI EAAQAMGSGP IEIIFRVLLK ECIPGLVRAT TITAINLISL TAMAGAIGAG
GLGDFAIRFG YQRNQTDVTY ASVVVLVLLV SVIQIVGNVV SRKCTH