Gene Cphy_1229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1229 
Symbol 
ID5744834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1552260 
End bp1553165 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content34% 
IMG OID641292334 
ProductMarR family transcriptional regulator 
Protein accessionYP_001558346 
Protein GI160879378 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTAC AGCAGTTAAG ATATGTAATC ACGATAGCAG ATTGCGGTTC TATGAATGAA 
GCTGCAAAAC AGCTTTTCAT CTCACAACCT AGCCTTTCGG GAACGATAAA GGAACTGGAA
TTAGAAATAG GTTTTGATAT CTTTCTTCGT TCGAATCGAG GAATCGTAAT AACTCCGGAA
GGAGAAGAGT TTCTTACCTA TGCAAAGCAA GTATCAGAGC AATATCGGTT ATTGGAAGAT
AAGTATATTG AAAAGAAGTC AAAGAAAAAA TTCAGTGTAT CTATGCAACA TTATAGTTTT
GCAGTAAAAG CCTTTGTTGA GGTAGTGAAA AAGGTTGGGA TGGAGCAGTA TGAATTTGCA
GTTCATGAAA CTAAGACCAA TGAAGTGATA GAAAATGTAA AGAATTTTAA GAGTGAATTA
GGAGTATTAT ATCTCAATGA TTTTAATGAA CAGGTTATGA CTAAGGTTCT TAGAGAGAAT
AGTTTAGAAT TTGTAGAGTT ATTTCAATGT GACACTTACG TATATCTTTG GTCTGAGCAT
CCGCTTGCAA ACAAAGAAGT CATTTCTATG AAAGAATTAG AAGAGTACCC ATGTCTAGCT
TTTGACCAAG GCAAAAATAA CTCCTTCTAT CTAGCAGAAG AAGTTAAGAG TACTTATGAC
TACAAACGTA TTATTAAAGC AAATGATAGA GCTACAATGT TAAATTTAAT GATAGGCTTA
CATGGATATA CCCTATGCTC CGGAATCATT TGCGAGGAAT TAAACGGGGA TGACTATAAA
GCTGTACCTT TGGTTGAAAG TGAAAAAATG AGAATTGGCT ACATTAAACG AAAAGGCTCT
ATTATCAGTA ATAATGGTGA ATTATATATC AAGGAGCTAA TGAATTATAA AGACATGGTG
TTATAG
 
Protein sequence
MTLQQLRYVI TIADCGSMNE AAKQLFISQP SLSGTIKELE LEIGFDIFLR SNRGIVITPE 
GEEFLTYAKQ VSEQYRLLED KYIEKKSKKK FSVSMQHYSF AVKAFVEVVK KVGMEQYEFA
VHETKTNEVI ENVKNFKSEL GVLYLNDFNE QVMTKVLREN SLEFVELFQC DTYVYLWSEH
PLANKEVISM KELEEYPCLA FDQGKNNSFY LAEEVKSTYD YKRIIKANDR ATMLNLMIGL
HGYTLCSGII CEELNGDDYK AVPLVESEKM RIGYIKRKGS IISNNGELYI KELMNYKDMV
L