Gene Cphy_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1228 
Symbol 
ID5744833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1551030 
End bp1551938 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content40% 
IMG OID641292333 
Productpyridoxal-5'-phosphate-dependent protein beta subunit 
Protein accessionYP_001558345 
Protein GI160879377 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATATG ATAATATGCA GGAGTTAATC GGGAATACGC CCCTTGTGAA ATTAAATTAT 
GTAGGGGTTC CAAAGGAAGT GAATTTATAT GCAAAGCTAG AATATTGGAA CCCTTCCGGA
AGTGTAAAGG ATAGAACCGG GCTTTATATG ATAAAGGATG CAGAAGAAAA AGGGTTATTA
AGAAGAGGAG CAACAATCAT TGAGGCAACT GCGGGGAATA CAGGCTTAGG AATTGCTATG
GCAGCCTTAA ACCGTGGATA CCGGGTTATC TTTGTTGTGC CTACGAAATT TTCTGTAGAA
AAACAAACCT TATTACGCGC TCTAGGTGCA GAGATTATCA ATACACCACG TGAGGAAGGA
ATGCAAGGTG CGAATCATAA GGCATCAGAA CTGTTAAATG AAATTCCGGG TTCGATATCT
CTTCGTCAGT TTGATAACCT TGCAAATCCC AAAGCGCATT ATGAAACGAC AGGTAAAGAA
ATATATCAAG ATTTAGGGGA CTCGATTCAT TACTTTATTG CAGGTGCAGG CAGCGGTGGC
ACCTATTCTG GAATCGTTAA GTATTTAAAG GAGAGAAATC CTAAGATACA AGGTATATTA
GCTGACCCTG TTGGATCTAC CATGGGAGGC GGAGAACATG CTGATTATGA TATTGAGGGG
ATTGGAAACG ATTTTATTGC AGGAACAATG GATATGAGTT TAGTGGATGA TGTTGTAAAG
ATAACGGATA CGGAAGCATT TGAAGGGGCG AGACTGCTGG CATTAAAAGA GGGAATAATT
GCAGGGTCAT CCTCTGGTGC AGCTTTGGCA GCAGTAATAA AATTAGCAGA GAAAGTTAAA
AAAGGAAACA TTGTAACCCT ATTTCCGGAT CGAGGGGATA GATACTTCAG TAAAAATTTA
TACTTATAA
 
Protein sequence
MLYDNMQELI GNTPLVKLNY VGVPKEVNLY AKLEYWNPSG SVKDRTGLYM IKDAEEKGLL 
RRGATIIEAT AGNTGLGIAM AALNRGYRVI FVVPTKFSVE KQTLLRALGA EIINTPREEG
MQGANHKASE LLNEIPGSIS LRQFDNLANP KAHYETTGKE IYQDLGDSIH YFIAGAGSGG
TYSGIVKYLK ERNPKIQGIL ADPVGSTMGG GEHADYDIEG IGNDFIAGTM DMSLVDDVVK
ITDTEAFEGA RLLALKEGII AGSSSGAALA AVIKLAEKVK KGNIVTLFPD RGDRYFSKNL
YL