Gene Cphy_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1223 
Symbol 
ID5743322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1545011 
End bp1546171 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content31% 
IMG OID641292328 
ProductABC-2 type transporter 
Protein accessionYP_001558340 
Protein GI160879372 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGTAT TTAATACATT TTTTAAACTA TTAGCTAAAA ATAAATGGAG TATTATCATT 
AATCTAGTAG TCTTTTTAGG TCTTAGCTCC ATTGCCGTAC AAAATGGTTC TCCAGAAGAT
CAGATTAATT TTAAAGACAT AAAACTGAAA CTTTCTGTCA TTGACCGTGA TCATTCAGCA
ACTAGTATGG AACTTAAGAA TTATATTGGT GAACTCCATA TATTGACTGA ACTAGAAGAT
GATCCTGAAG TTTTTCAAGA CGAACTTTTC TTTAATACGG TCTATGAAAT CATCATTATA
CCAGCTGGAT TTGAAGAAAA TCTTATCGCC GGGAAAGATT TGCCACTAGA AACTTTAGAA
GCACCTGATG CTGGTGTTAC AGCATTATCT AATATACAAT TTGAGCAAAT CATGAAATAT
TTAAAAACCT ATCTTGCAAT TGGGTATACA CCATCAGATG CTATGTTAAA AACGAAAGAT
ATCATGCAAA CCAATGCGCC AGTTAGTCTT CAATTAGATA ATCATAGTTT AGAGGAGGCT
CCAAGATGTA ATTACTATTT TCAATACCTC CCTTACCCGA TGGTTGCAAT ATTGGTATCC
TGCATTAGTT TAATTCTCAT ACTATTTAAT CAAAAAGATA TAAAAAACAG AACGGTTTGT
GCATCTTTTT CTTTAAAAAA GCGTAATTTT GAATTATCTC TTGCTAACAT CATAGTTGCT
ATTATTATTT GGGTTATACT TATGCTATTT CCTTTTATTC TAGTAGGAGC TGACATGATA
CACTCTGGTG TATACGGATT TTATCTACTG AATAGCTTTA CCTTCCTCAT TGTTAGTTTT
AGCATATCCT ATCTCATTGG TATATTTAGT AATTCCGTGG AAACAATCGC TATCTTTAGT
AACTCAGTAT CTCTTGGACT ATGCTTTTTA GGTGGTGTAT TTGTTCCTCA GTCGGTTATG
AGTAAACAAA TACTTTACAT TTCAAAATTT TTACCTTCGT ACTGGTACGT TATTACGAAT
AAGATTATAG GAAAAAATAC AAAACTTGTT GGAAGTGTTT TAAAAGATGT TATATTTGGT
ATTTTAATAC AATTTTGCTT TGCGATTGCT ATCTTTGGTA TCTCGTTGGT AATTACAAAA
AGAAAGACTC AAGCTTGTTA G
 
Protein sequence
MIVFNTFFKL LAKNKWSIII NLVVFLGLSS IAVQNGSPED QINFKDIKLK LSVIDRDHSA 
TSMELKNYIG ELHILTELED DPEVFQDELF FNTVYEIIII PAGFEENLIA GKDLPLETLE
APDAGVTALS NIQFEQIMKY LKTYLAIGYT PSDAMLKTKD IMQTNAPVSL QLDNHSLEEA
PRCNYYFQYL PYPMVAILVS CISLILILFN QKDIKNRTVC ASFSLKKRNF ELSLANIIVA
IIIWVILMLF PFILVGADMI HSGVYGFYLL NSFTFLIVSF SISYLIGIFS NSVETIAIFS
NSVSLGLCFL GGVFVPQSVM SKQILYISKF LPSYWYVITN KIIGKNTKLV GSVLKDVIFG
ILIQFCFAIA IFGISLVITK RKTQAC