Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1223 |
Symbol | |
ID | 5743322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 1545011 |
End bp | 1546171 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641292328 |
Product | ABC-2 type transporter |
Protein accession | YP_001558340 |
Protein GI | 160879372 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGTAT TTAATACATT TTTTAAACTA TTAGCTAAAA ATAAATGGAG TATTATCATT AATCTAGTAG TCTTTTTAGG TCTTAGCTCC ATTGCCGTAC AAAATGGTTC TCCAGAAGAT CAGATTAATT TTAAAGACAT AAAACTGAAA CTTTCTGTCA TTGACCGTGA TCATTCAGCA ACTAGTATGG AACTTAAGAA TTATATTGGT GAACTCCATA TATTGACTGA ACTAGAAGAT GATCCTGAAG TTTTTCAAGA CGAACTTTTC TTTAATACGG TCTATGAAAT CATCATTATA CCAGCTGGAT TTGAAGAAAA TCTTATCGCC GGGAAAGATT TGCCACTAGA AACTTTAGAA GCACCTGATG CTGGTGTTAC AGCATTATCT AATATACAAT TTGAGCAAAT CATGAAATAT TTAAAAACCT ATCTTGCAAT TGGGTATACA CCATCAGATG CTATGTTAAA AACGAAAGAT ATCATGCAAA CCAATGCGCC AGTTAGTCTT CAATTAGATA ATCATAGTTT AGAGGAGGCT CCAAGATGTA ATTACTATTT TCAATACCTC CCTTACCCGA TGGTTGCAAT ATTGGTATCC TGCATTAGTT TAATTCTCAT ACTATTTAAT CAAAAAGATA TAAAAAACAG AACGGTTTGT GCATCTTTTT CTTTAAAAAA GCGTAATTTT GAATTATCTC TTGCTAACAT CATAGTTGCT ATTATTATTT GGGTTATACT TATGCTATTT CCTTTTATTC TAGTAGGAGC TGACATGATA CACTCTGGTG TATACGGATT TTATCTACTG AATAGCTTTA CCTTCCTCAT TGTTAGTTTT AGCATATCCT ATCTCATTGG TATATTTAGT AATTCCGTGG AAACAATCGC TATCTTTAGT AACTCAGTAT CTCTTGGACT ATGCTTTTTA GGTGGTGTAT TTGTTCCTCA GTCGGTTATG AGTAAACAAA TACTTTACAT TTCAAAATTT TTACCTTCGT ACTGGTACGT TATTACGAAT AAGATTATAG GAAAAAATAC AAAACTTGTT GGAAGTGTTT TAAAAGATGT TATATTTGGT ATTTTAATAC AATTTTGCTT TGCGATTGCT ATCTTTGGTA TCTCGTTGGT AATTACAAAA AGAAAGACTC AAGCTTGTTA G
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Protein sequence | MIVFNTFFKL LAKNKWSIII NLVVFLGLSS IAVQNGSPED QINFKDIKLK LSVIDRDHSA TSMELKNYIG ELHILTELED DPEVFQDELF FNTVYEIIII PAGFEENLIA GKDLPLETLE APDAGVTALS NIQFEQIMKY LKTYLAIGYT PSDAMLKTKD IMQTNAPVSL QLDNHSLEEA PRCNYYFQYL PYPMVAILVS CISLILILFN QKDIKNRTVC ASFSLKKRNF ELSLANIIVA IIIWVILMLF PFILVGADMI HSGVYGFYLL NSFTFLIVSF SISYLIGIFS NSVETIAIFS NSVSLGLCFL GGVFVPQSVM SKQILYISKF LPSYWYVITN KIIGKNTKLV GSVLKDVIFG ILIQFCFAIA IFGISLVITK RKTQAC
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