Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1221 |
Symbol | |
ID | 5743320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1541304 |
End bp | 1543175 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641292326 |
Product | hypothetical protein |
Protein accession | YP_001558338 |
Protein GI | 160879370 |
COG category | [S] Function unknown |
COG ID | [COG3864] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCATG AGGTTAAGCA AAGACTAAGG CAGCTTGGAG AGCGAATCTT AAAAAATAGT TCCAATGAGT TGTACTTATC CATGCGTTTT TTAGATGTTC CACTCAGTGA ATTAAATTAT GAGCTACGGA TGTCCTCTTT TTATATGGGA ACGGACGGAA GTACTATTTA TTATAATCCT AGATTTGTAA TAGAAAAATA CACTTATGAT AGTGTATATG TAAACCGTTC CTATCTTCAC ATGTTACTCC ATAGTATATT TCGTCATATG TATTTAAGAG AAGAACGAGA CGAAGAAAAA TGGAATTTAG CATGTGATAT CGCAGTGGAA TATATTATAG ATGGCCTGGA TAATAAGGCA ACGAAACGAC TTGTTACATC TCGTAGAGAA GAACTTTATG AACGTTTATC CAAGGAACTT AAGGTATTCA CAGCGGAGGG AATCTATCAT TTGCTTCAAA CAAATTGGTT AACTGAGCGA GAGCTTGTTC AATATAGCGC TGAATTCTTA GTATGCGACC ATCAGTTTTG GGATTTTGGA ATCTCAAAAA ATAAAGTGAA GGATAGTGAG GACTCTAATC AAAATGAGAA TCCTGACTCT TCACAAAAGA ATGAGCAAGC AGACCAAGAG AAGAATTCAA AGGAACAAAC AAGAGAGAAT CAAACAGGGG AAGAAAAACA AGATAAAGAG AAACAAGAAA AAGAACAACA AGATAATGAA CAAGGGAACA AGGATAAGGG GAATAATCAA GAAGGAAAAA ACGAGACTAG GGAAGATAAG ACTGAAGAAG AAAACAGTCA AGAAAATAGA ACTCTAGAAG ATAAATCACA AGAAGATAAA TCACAAGAAG ATAAATCACA AGAAGATAAA TCACAAGAAG ATAAATCACA AGAAGATAAA TCACAAGAAG ATAAATCACA AGAAGATAAA TCTAAAGATG ATAAATCCGA AGAAGATAAA TCCAGTGAAG ATAATTCAGA AAAAGATAAA TCCAATGAGG ATAAATTCAA AGAAGATAGA ACCAAAGAAA ATCAAACACA AGAATATATG TCATATGACA ATCCGATGGA TGACAGCGGA CTTCATGATC GTGAAGCTAA CAATAAAAAA GCGCAGGAAA ATCGTTGGAA GGATATCAGT GAAAAGCTTA AGACAGACCT TGAGACTTAT CAGGCAAATA ATCCAAAAGC GACAGAGAGC TTACTAAAAG GTATTGGTGC AGCTAATCGT GAAATCTATG ATTATCAGAC ATTTCTTCAT AAATTTGCAG TATACAAAGA GCGCCTTCAA GTAGATGAGG ATTCGTTTGA CTATGGTTTT TATACTTTTG GTATGGAGCA TTATGGGAAT GTTCCTTTTA TAGAACCATT GGAATATAAG GATGAAATGC GTGTTGAGGA GATTGTAATA GCAATTGATA CTTCTGGATC ATGTGCTAGT AGTTTAATCT ATCGTTTTTT AAAAGAAACA ATAAAAATTC TTAAAAACAC AGAGACATTT CATGATAAAT TTCGAATTCA TTTGATTCAG TGCGATGAAG AAATTAAGGA ACATAAGATC CTTACAAATC TCATGGAACT AAATGATTAC ATGGAACATT TTCAGGTAAA AGGATTTGGT AATACAGATT TTAGACCTGT GTTTGAATAT ATCGGGGAAT TAAAACAAAT GGGGGAATTA AAGCGTTTAA AAGGATTACT ATATTTTACA GATGGATATG GTATTTTTCC TAGCAAACAA CCAGAATACG AAACTGCCTT TATTTTTGTT CGGAATCAGT ATGAGGAAGA CAAAGTACCT GCCTGGGCAA TGAAGGTAGT ATTAGAAGAA GAACAAATTG AAAAGATGGG TGATAGTAAC GATGAATATT AA
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Protein sequence | MEHEVKQRLR QLGERILKNS SNELYLSMRF LDVPLSELNY ELRMSSFYMG TDGSTIYYNP RFVIEKYTYD SVYVNRSYLH MLLHSIFRHM YLREERDEEK WNLACDIAVE YIIDGLDNKA TKRLVTSRRE ELYERLSKEL KVFTAEGIYH LLQTNWLTER ELVQYSAEFL VCDHQFWDFG ISKNKVKDSE DSNQNENPDS SQKNEQADQE KNSKEQTREN QTGEEKQDKE KQEKEQQDNE QGNKDKGNNQ EGKNETREDK TEEENSQENR TLEDKSQEDK SQEDKSQEDK SQEDKSQEDK SQEDKSQEDK SKDDKSEEDK SSEDNSEKDK SNEDKFKEDR TKENQTQEYM SYDNPMDDSG LHDREANNKK AQENRWKDIS EKLKTDLETY QANNPKATES LLKGIGAANR EIYDYQTFLH KFAVYKERLQ VDEDSFDYGF YTFGMEHYGN VPFIEPLEYK DEMRVEEIVI AIDTSGSCAS SLIYRFLKET IKILKNTETF HDKFRIHLIQ CDEEIKEHKI LTNLMELNDY MEHFQVKGFG NTDFRPVFEY IGELKQMGEL KRLKGLLYFT DGYGIFPSKQ PEYETAFIFV RNQYEEDKVP AWAMKVVLEE EQIEKMGDSN DEY
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