| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1210 |
|---|
| Symbol | |
|---|
| ID | 5743309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1527470 |
|---|
| End bp | 1528762 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641292315 |
|---|
| Product | nucleotide sugar dehydrogenase |
|---|
| Protein accession | YP_001558327 |
|---|
| Protein GI | 160879359 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAATATAG CTGTTGCGGG TACCGGTTAC GTAGGATTAG TGGCAGGTGT ATGTTTTGCT
GAAAAAGGAC ATAAGGTTAT CTGTGTTGAT ACAGATAAGG AGAAGGTTGA ATTGATGAAA
TCCGGAGTTT CTCCAATTTA TGAAGCTGAT TTAGAAGATC TGATGAGAAA GAATTATGAA
GAAGGTCGAC TAAATTATAC TACCGACTAT GGATTGGCTT ATAAAAATGC AGATGCAATC
TTCATAGGAG TTGGAACACC TGAACTACCA GATGGATCTG CGAATCTTTC CTACATAGCT
ACAGTAGCAC GACAAATTGC AGAGTCTGTT GAACAAGATT GTCTAGTAGT TGTTAAGTCC
ACCGTTCCTG TTGGTACCAA TGATAAAGTT GAACAGTTTA TAAAAGACTT CCTTATCCAT
GATGTAAAAG TTGAAGTAGC AAGTAATCCA GAGTTTCTAG CACAGGGTAG TGCTGTAAGG
GATACTTTGA AAGCTTCAAG AGTCATAATA GGAACAGAAA GTAAAGAGGC TGAAGATAAG
CTTCTAGAAA TTTATGAACC TTTTGGTCTA CCTATGGTAT CTGTAAGTAG AAGAAGTGCA
GAAATGATAA AATATGCTTG TAATAATTTT CTCGCCTTAA AAATCTCCTA TATGAATGAT
ATTGCAAATT TATGCGAATT GGTTGATGCA GATATTGAAG AGGTAGCAAA GGGGATGTCT
TTTGATGCTA GAATTGGTTC TAGCTTCTTA AATGCAGGTA TAGGCTATGG AGGAAGCTGT
TTTCCGAAGG ATACCAAAGC TTTAAAATAT CTTGCAAAAC AATATTACTA TGATTTAAAA
ACAGTAGGAG CAGCAGTAGA AGTTAATAAA GAACAAAAAA CAAAGTTATT TACGAAAGCC
AGGAAACGAC TAATTACGTT CCAGGGGCTT AAAGTTGCAG TATTAGGACT TTCTTTTAAA
CCTGGTACAG ATGATTTAAG AGAAGCACCA TCCCTTGATA ATATAGCACT TCTTCTTGAA
CAAGGTGCAA ATATCTATGC ATATGACCCT GTAGCTATGT GTAACTTCAA AAAAAGATAT
CCGGATGAAA TTATATATAC ACATACACCA GAAGAAGCAT TAGAAGGAGC CAATGTATGT
TTTATCTTTA CTGAATGGAA AGAAATTAAA GAAACTACGC CAGATACATA TAAAAAATAT
ATGAGGACAC CTTTAGTATA TGATGGACGT AATATATATA AGCCTGAGGA AATGAAGGAA
GCAGGCATAG AGTATTATTC TATTGGAAGA TAA
|
|---|
| Protein sequence | MNIAVAGTGY VGLVAGVCFA EKGHKVICVD TDKEKVELMK SGVSPIYEAD LEDLMRKNYE
EGRLNYTTDY GLAYKNADAI FIGVGTPELP DGSANLSYIA TVARQIAESV EQDCLVVVKS
TVPVGTNDKV EQFIKDFLIH DVKVEVASNP EFLAQGSAVR DTLKASRVII GTESKEAEDK
LLEIYEPFGL PMVSVSRRSA EMIKYACNNF LALKISYMND IANLCELVDA DIEEVAKGMS
FDARIGSSFL NAGIGYGGSC FPKDTKALKY LAKQYYYDLK TVGAAVEVNK EQKTKLFTKA
RKRLITFQGL KVAVLGLSFK PGTDDLREAP SLDNIALLLE QGANIYAYDP VAMCNFKKRY
PDEIIYTHTP EEALEGANVC FIFTEWKEIK ETTPDTYKKY MRTPLVYDGR NIYKPEEMKE
AGIEYYSIGR
|
|---|
| |