| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1174 |
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| Symbol | |
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| ID | 5742897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1489322 |
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| End bp | 1491925 |
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| Gene Length | 2604 bp |
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| Protein Length | 867 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641292279 |
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| Product | pyruvate formate-lyase |
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| Protein accession | YP_001558291 |
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| Protein GI | 160879323 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1882] Pyruvate-formate lyase |
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| TIGRFAM ID | [TIGR01774] pyruvate formate-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00269172 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGCTG AACCCAAAAA AGGATATGAA AAATCACCTC GTATACAAAA GCTTATGGAT
GCTTTATACG AGAAAATGCC AGAGATTGAA TCAAAACGTG CAGTTTTAAT CACGGAATCG
TATCAGCAGA CGGAAGGAGA GCCTATCATT AGTAGACGCT CCAAGGCTTT TGAACATATA
GTAAAGAATC TTCCAGTAGT AATTCGAGAG AATGAATTAA TTGTAGGAAG CGCAACCGTT
GCAGAAAGAG GATGTCAAAC CTTTCCGGAA TTCTCTTTTG ATTGGTTAAT TGCTGAACTT
GATACCGTAG CAACTAGAAC TGCTGATCCG TTTTATATCT CAGAGGAAGC AAAAAAAGAG
TTAAGAAAAG TACATAGCTA TTGGAAGGGA AAAACAACAA GTGAATTAGC AGATTATTAC
ATGGCTCCAG AAACGAAACT TGCGATGGAG CACAATGTAT TTACACCAGG TAACTATTTT
TATAACGGTG TAGGGCACAT TACAGTGCAG TATGATAAGG TAATTGCGAT CGGTTATGAA
GGAATTAAAG ATGAAGTCTT AAGCAGAAAA AAAGAATTAC ATCTAGGTGA TGCTGATTAT
GCAAGTCGCC TTACTTTCTA TGACGCTGTA ATCAGAAGTT GTGACTCGGC TATTTTGTAT
GCTAAGAGAT ATGCAGCGGA AGCAAAAAGA CTTGCACTTT CTTGTCAGGA TGAGAAGAGA
AGACAAGAAC TTTTAATGAT TTCATCTAAT TGTGAGAGAG TCCCAGCAAA GGGTGCGAAT
ACATTTTATG AAGCATGTCA GGCATTTTGG TTTGTACAAC TTTTATTACA GATTGAAGCT
AGTGGACATT CGATTTCACC AGGTAGATTT GACCAATATT TATATTCATA TTATAAAGCA
GATCGTGAAG CAGGCAGAAT CACTGGTGAA CAGGCACAAG AAATCATCGA TTGTATTTTT
GTGAAATTAA ATGATATTAA CAAATGCCGT GATGCTGCTT CTGCGGAAGG TTTTGCAGGC
TATGGTATGT TCCAGAACAT GATTGTTGGC GGACAGGATA GTAACGGAAG GGATGCTACG
AATGAACTTA GTTTTATGAT ATTAGAGGCA TCCATACACA CCATGCTTCC ACAGCCTTCC
TTAAGTATCC GTGTATGGAA TGGTTCTCCG CATGATTTAC TAATTAAAGC TGCGGAAGTT
ACCAGAACTG GTATCGGTTT ACCTGCTTAT TACAACGATG AAGTTATTAT CCCAGCTATG
ATGAATAAGG GTGCAACTTT AGAGGAAGCG AGAAACTATA ATATTATCGG TTGCGTGGAA
CCTCAAGTAC CTGGTAAGAC CGACGGATGG CATGACGCAG CATTCTTTAA TATGTGTCGC
CCATTGGAAA TGGTATTTTC TAGTGGATAT GAAAATGGAA AATTAGTTGG TGCTCCAACA
GGTTCGGTTG AAAACTTCAC TACATTTGAG GCATTTTATG ATGCTTATAA AACTCAGATG
GAATACTTTA TCTCTTTACT AGTCAATGCG GATAATTCAA TCGATATTGC GCATGCAAAA
CTTTGCCCAT TACCATTTGA ATCCTCTATG GTAGAAGATT GTATCGGACG TGGGTTATGT
GTTCAAGAAG GTGGAGCAAA ATATAATTTT ACCGGACCAC AAGGGTTTGG TATCGCCAAT
ATGACAGACT CCTTATATGC GATTAAGAAA CTTGTATACG AAGAAGGCAA GGTTTCTATT
ACTGAATTAA AAGAAGCACT TCTACATAAT TTCGGAATGA CAACGAAGAA CGCTGGCTTA
AAGGAAAGCT CTCATCTGTC CATAGATATC ATATTAGCGC AGCAAATCAC AGTGCAGATT
GTAAAAGAAT TGAAAGAGCG TGGAAAAGAG CCTTCAGAGA AGGAAATAGA ACAAATATTA
AAGACAGTTC TTGAAGCAAA GAAAGAAAAC ACAGAGAGTC CAATATCTAC AAGAGTGTCA
GAGAACACAA GTAATCATTC AAGATATCAA GAAATTCTAC AGATGATTGA AGTGTTACCA
AAGTACGGAA ATGATATCCT AGAGATTGAT GAATTCGCCA GGGAGATTGC TTATACCTAT
ACAAAGCCAT TACAAAAATA TAAAAATCCA AGAGGTGGTG TATTCCAAGC TGGTTTATAT
CCGGTTTCCG CAAATGTACC GTTAGGTGAA CAAACAGGGG CTACTCCAGA TGGAAGACTT
GCGAATACCC CAATTGCAGA TGGTGTTGGC CCAGCGCCAG GACGTGATAC CAAAGGACCA
ACAGCGGCAG CTAATTCCGT AGCACGCCTT GATCATATGG ATGCAACAAA TGGTACCTTA
TACAATCAAA AATTCCATCC ATCTGCGTTA CAGGGTCGTG GTGGACTAGA GAAGTTTGTA
GCGTTAATCC GTGCCTTCTT TGATCAAAAG GGTATGCATG TACAGTTTAA TGTAGTAAGT
AGAGAAACTT TATTAGACGC ACAAAAGCAC CCAGAAAACT ATAAACATTT GGTGGTACGT
GTTGCTGGTT ACAGTGCCCT ATTTACTACA TTATCCAGGT CCTTACAGGA TGATATTATT
AATCGAACAA CACAAGGGTT CTAG
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| Protein sequence | MMAEPKKGYE KSPRIQKLMD ALYEKMPEIE SKRAVLITES YQQTEGEPII SRRSKAFEHI
VKNLPVVIRE NELIVGSATV AERGCQTFPE FSFDWLIAEL DTVATRTADP FYISEEAKKE
LRKVHSYWKG KTTSELADYY MAPETKLAME HNVFTPGNYF YNGVGHITVQ YDKVIAIGYE
GIKDEVLSRK KELHLGDADY ASRLTFYDAV IRSCDSAILY AKRYAAEAKR LALSCQDEKR
RQELLMISSN CERVPAKGAN TFYEACQAFW FVQLLLQIEA SGHSISPGRF DQYLYSYYKA
DREAGRITGE QAQEIIDCIF VKLNDINKCR DAASAEGFAG YGMFQNMIVG GQDSNGRDAT
NELSFMILEA SIHTMLPQPS LSIRVWNGSP HDLLIKAAEV TRTGIGLPAY YNDEVIIPAM
MNKGATLEEA RNYNIIGCVE PQVPGKTDGW HDAAFFNMCR PLEMVFSSGY ENGKLVGAPT
GSVENFTTFE AFYDAYKTQM EYFISLLVNA DNSIDIAHAK LCPLPFESSM VEDCIGRGLC
VQEGGAKYNF TGPQGFGIAN MTDSLYAIKK LVYEEGKVSI TELKEALLHN FGMTTKNAGL
KESSHLSIDI ILAQQITVQI VKELKERGKE PSEKEIEQIL KTVLEAKKEN TESPISTRVS
ENTSNHSRYQ EILQMIEVLP KYGNDILEID EFAREIAYTY TKPLQKYKNP RGGVFQAGLY
PVSANVPLGE QTGATPDGRL ANTPIADGVG PAPGRDTKGP TAAANSVARL DHMDATNGTL
YNQKFHPSAL QGRGGLEKFV ALIRAFFDQK GMHVQFNVVS RETLLDAQKH PENYKHLVVR
VAGYSALFTT LSRSLQDDII NRTTQGF
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