Gene Cphy_1153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1153 
Symbol 
ID5742876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1452167 
End bp1452907 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content35% 
IMG OID641292258 
ProductABC transporter related 
Protein accessionYP_001558270 
Protein GI160879302 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAC TAACAATTCG GAATATCTCC AAATCATATG GAGATAAAGC AGTATTAAAG 
AATGTCTCAG TGGTATTAAA GGAAAATGAG CTGGTTTGTC TGCTTGGTGT CAGTGGGGCA
GGTAAAACAA CGCTTTTTAA TATTATAGCA GGATTATTAG AACCAGATAA AGGTGAAGTT
CTACTGGATG GTAAAGATAT TACAAATCAA GCAGGTAATA TCAGCTATAT GCTTCAAAAG
GATCTTTTAC TGCCATATAA GACTATTGAG GATAACGTTT CATTGCCACT GATTATAAAG
GGAATGAAAA AGCGAGATGC CAGGGATAAA GTAGCAGATT ATTTTGAGGA ATTCGGGCTG
GAAGGTACAC AAAAGCTCTA TCCTGCCAGT TTATCCGGTG GTATGAGACA ACGAGCTGCA
CTTCTTAGAA CCTATTTATT TTCAGATAAG ATTGCTTTAT TAGATGAACC ATTTAGTGCT
CTTGATATGA TAACCAAAGG GAAAATTCAT CGTTGGTATC TTGATATCAT GGAAAAGATA
AAACTTTCCA CGTTATTTAT TACCCATGAT ATTGATGAGG CTATTCTGTT ATCGGATCGT
ATTTATCTTC TAACAGGTGA ACCGGGACAG ATTACGAAGG AAATCATTAT GAAGGAAAAA
CGTCCAAGAG ACGAAGAATT TTTGTTAAGT TCAGAATTTC TTAGGTATAA GAAGGAAATA
TTGGAGAGTT TACAGGAGTA A
 
Protein sequence
MDKLTIRNIS KSYGDKAVLK NVSVVLKENE LVCLLGVSGA GKTTLFNIIA GLLEPDKGEV 
LLDGKDITNQ AGNISYMLQK DLLLPYKTIE DNVSLPLIIK GMKKRDARDK VADYFEEFGL
EGTQKLYPAS LSGGMRQRAA LLRTYLFSDK IALLDEPFSA LDMITKGKIH RWYLDIMEKI
KLSTLFITHD IDEAILLSDR IYLLTGEPGQ ITKEIIMKEK RPRDEEFLLS SEFLRYKKEI
LESLQE