| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1071 |
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| Symbol | |
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| ID | 5741907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1354865 |
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| End bp | 1357051 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641292178 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001558190 |
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| Protein GI | 160879222 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4124] Beta-mannanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.535323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAGAG GTAAAAAGAG AGTAATTGCA ATGGCGGTAT CTTTATGGGT TGTCGTAGCC
ATGCTATTTA CTAGTGTACC TGGACCTTTG GGGTCAATAA TAGGTACAAA AAGCAGTACA
AAGGTACAAG CTGCTGAGAA ATTTTCAACG AAATTAGAAG CAGAGAATGG AAAGATGACT
GGTACTGTAA CGGTAGCCAC TACAAGGCCA GGGTATAGTG GAACTGGATA TGTCACCGGT
TTTACTCAAA ACAGCAGTAA TTCCTGGTCA ACTTCTGTAG TGATTCCGAC AACTGGTCAC
TACACATTTA CAATCCGAAG TGCTGCAGAT AGTTATAAAG AAAATTATCT TTATATTAAT
GGTACACAAG CTGGAATTAT TTATAGTACA GGTGATGGTA AATGGGGAGA TACTGTCATC
GAAAGCGTAT ACTTAGAGGC TGGAACTATC ACTTTATCCG TAAAGGAAAA TTGGGGTTGG
TTTGACCTAG ATTACATTGC AATTGAGGCG GGAAGTGGTG TTGATAACTC TGTTTATCAG
AAGGCAACGT CTACTCTAGT AAACCCGAAT GCAAATGAAA AAACAAAGAA TATTATGGCA
TATCTAAAGA GTATCTACGG GAAAAAGACT TTAGCAGGTC AGTCCTGTAC GTTAAACGCA
AGCACTGAAA TTGAAGCACT TTATAAAGCA ACTGGAAAAT ATCCTGCAAT TCGTATGCTT
GATTTAATCT TTTGTTCTCC AGCAAGCGAC TGGCATTCCA CAGGAGAAGT TGATTTGGCA
CTTGACTGGG ATAAAAAAGG AGGACTAACG ACATTTCAGT GGCATTGGCA TGCTCCAAAA
GGTGGTGCAT CTTTTTATAC CGATAAAACA TCATTTGATT TATCCAAAGC AGTAACATCT
CAAAATATCA GTAGATTGCC ATTGGCAGAT GTAAAAGCAT TGTATGATTC GGGTAAGATT
TCTGAAGAAT GTTATCTGAT GGTTCGCGAT ATCGATGCAA TCTCTGGCTA TCTAAAGCAA
TTACAAGATG CCGGTGTCAC AGTTCTTTGG AGACCGCTTC ATGAAGCGAG TGGCGGTTGG
TTCTGGTGGG GCGCTGCCGG AAAAGATCCA TACCTTTGGT TATATCGCCT CATGTTTGAT
CGCCAGACGA ATTATCATAA ATTAAACAAC CTAATATGGG TATGGAATGG ACAGGATGCA
GCTTGGTATC CAGGTGATGC CTATTGTGAT ATCGTAGGAA CTGATATTTA TGCTGATAAT
CGCAATTACA GTGCACAAAC AGCTCAATTT AATAAAACAG TAAATTATGC GAATGGAAAT
AAAATGGCAG CTCTTAGTGA AAATGGTGTA ATGATTGACC CAGCTTTGAT GACGAGAGAC
AATACCTTCT GGTTATGGTT TGCAGTATGG TATGGAGATT TCCTTATCGA TTATTCGGGC
AACCTAAATG GAACATATAC TGAGGCTTCT ATGGTGAAAA AGGTTTATAA CAGTAATGAG
GTGATAACCT TGGATAAACT ACCTAATTTT AATGGAACAA CTCCAACGGT AACACCAACA
CCAACACCAA CAGTTAAGCC TACAGTAACG CCAACAGTAA CACCGACGCC AACAGTTAAG
CCAACGGTAA CGCCAACAGC AACACCGACA GCAACACCGA CACCAACAGT TAAGCCAACA
GTAACACCTA CACCAACGGT TACACCATCA GTAACACCAA TTCCAGGTAG TTTTACTCTT
TCTTTAACCA ATACAGGTAA TAACAATCTA TCAACAAACA CAATAAATGC TGATTTTAAG
ATTAAACATG AGAAAGGAAG CGATATAGAT TTATCTAAGC TAGTGATTCG TTATTATTAT
ACGAAGGAGG GAACTGCGAA GGAGAACTTC TATTGTGATA CTGCTGCAAT GCAATTAAAT
AAAGATCCAT GGTACATTCC ATATACATCG GTAGTTAATG GAACCTTTAA CTCAATGGCG
GTACCAAAAA CAAAAGCAGA TTCGTATCTT GATGTATCGT TTAACACAAC TGATAAATTA
TCCGCGGATT CTACCTTTAT AGTGAATATC AGATTTACGA AGAGTGATTG GAGCTTGTAT
AACCAAGAAA ATGATTATTC TTATGGAGAT AGTACAAAAG TTGTTGTGTA CTATAATGGT
AAGTTGGTAC TAGGTGTGGA GCCATAG
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| Protein sequence | MIRGKKRVIA MAVSLWVVVA MLFTSVPGPL GSIIGTKSST KVQAAEKFST KLEAENGKMT
GTVTVATTRP GYSGTGYVTG FTQNSSNSWS TSVVIPTTGH YTFTIRSAAD SYKENYLYIN
GTQAGIIYST GDGKWGDTVI ESVYLEAGTI TLSVKENWGW FDLDYIAIEA GSGVDNSVYQ
KATSTLVNPN ANEKTKNIMA YLKSIYGKKT LAGQSCTLNA STEIEALYKA TGKYPAIRML
DLIFCSPASD WHSTGEVDLA LDWDKKGGLT TFQWHWHAPK GGASFYTDKT SFDLSKAVTS
QNISRLPLAD VKALYDSGKI SEECYLMVRD IDAISGYLKQ LQDAGVTVLW RPLHEASGGW
FWWGAAGKDP YLWLYRLMFD RQTNYHKLNN LIWVWNGQDA AWYPGDAYCD IVGTDIYADN
RNYSAQTAQF NKTVNYANGN KMAALSENGV MIDPALMTRD NTFWLWFAVW YGDFLIDYSG
NLNGTYTEAS MVKKVYNSNE VITLDKLPNF NGTTPTVTPT PTPTVKPTVT PTVTPTPTVK
PTVTPTATPT ATPTPTVKPT VTPTPTVTPS VTPIPGSFTL SLTNTGNNNL STNTINADFK
IKHEKGSDID LSKLVIRYYY TKEGTAKENF YCDTAAMQLN KDPWYIPYTS VVNGTFNSMA
VPKTKADSYL DVSFNTTDKL SADSTFIVNI RFTKSDWSLY NQENDYSYGD STKVVVYYNG
KLVLGVEP
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