| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1041 |
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| Symbol | |
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| ID | 5741877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1314142 |
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| End bp | 1314855 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641292148 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001558160 |
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| Protein GI | 160879192 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAATA TATTATTTGA AGACAAGCAT ATCATTGTCT GTATCAAGCC AATTGGTGTA
TTATCACAAC CAGGTCAAGG GGAAGGTATG GATATGATTA CTCTTTTACA AGAGTATCGA
AAAAATAATA AGGAATCAGA TTACATTGGT CTTGTTCATC GATTAGATCG TAATGTTGGT
GGAGTTATGG TTTTTGCAAA GACAGAACTG GCAACTAAAA AATTATCAGT TGCAATTAGG
GAGCGCAATT TTACGAAAGA ATATATGGCT GTAATTCATG GCAGACCTTC GGAATCATCA
GGAATTTTAA AGGATCTCAT GTTTAAAGAT TCTTCAAAAA ATAAATCATT TGTTGTGAAT
CGAATGAGAA AAGGGGTAAA AGAGGCTTCC CTAGAATATC GTACGATTGA AACAATCGAG
GTAGCGAAAG GTGAGTTTTC ATTCATACGA GTAAAACTTC ATACTGGTCG TACCCATCAA
ATACGTGTAC AATTTGCATC TCGTAAATTA CCTCTAGTTG GTGATGGAAA ATATGGAGGA
AAGGATAATC AATGTGATGC AGCCCTTTGG TCATATCGAT TAGCATTTGT TCATCCACTT
ACCAAAGCTT TGGTAGATAT CAAGCAATTG CCACCGGAAC AGTATCCTTT TCATTTGTTT
TCAGAAGAGC TAAAAAATAA GGAAGTTAAC AGTGAAGTAA TGTTAGAGCA TTAA
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| Protein sequence | MFNILFEDKH IIVCIKPIGV LSQPGQGEGM DMITLLQEYR KNNKESDYIG LVHRLDRNVG
GVMVFAKTEL ATKKLSVAIR ERNFTKEYMA VIHGRPSESS GILKDLMFKD SSKNKSFVVN
RMRKGVKEAS LEYRTIETIE VAKGEFSFIR VKLHTGRTHQ IRVQFASRKL PLVGDGKYGG
KDNQCDAALW SYRLAFVHPL TKALVDIKQL PPEQYPFHLF SEELKNKEVN SEVMLEH
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