| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1022 |
|---|
| Symbol | |
|---|
| ID | 5741858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1292305 |
|---|
| End bp | 1293624 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641292129 |
|---|
| Product | Na+/H+ antiporter NhaC |
|---|
| Protein accession | YP_001558141 |
|---|
| Protein GI | 160879173 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1757] Na+/H+ antiporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000105643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGACAGG GTAAATTAAG TGGTTTACTC CCAATAGGAG TTTTTTTGAT ATTATTTATA
GGTAGCGGAA TTTTATTTCA AAATTTCTAT GCAATGCCTG CCATTGTTGC GTTTTTAATC
GCACTTGCTG TAGCATTGAT TCAAAACCCG AAAAAAAGCC TAAATGATAA GCTACGTGTT
GTGACACAAA GTATGGGAGA TGAAAATGTC ATGACAATGT GCTTGATATT TATACTAGCT
GGGGCATTTT CAGGTGCGGT TCAGGCAGCA GGAGGAGTAG AAAGCACGGT GAATTTTGGA
TTATCCATTA TGCCACCGAG TATTGCAGTA GCAGGGATTT TTATTATTGC TTGCTTTATC
TCGGTCGCAA TGGGGACAAG CGTTGGTACA ATTGCAGCAT TAACACCAAT AGCGGTTGGA
GTTGGTGATA AAACTGGATT TTCTATGGCA ATGTGTATTG GTGCTGTAGT TTGTGGTGCT
ATGTTTGGAG ATAATCTTTC TATGATTTCT GATACGACCA TTGCTGCTAC GAAGACACAA
GGTTGTGAAA TGAAAGATAA GTTTAAAGAG AATTTTTGGA TTGTATTGCC AGCTGCTATC
GTTACAATTA TTCTATTTCT TCTATTAGCA GGGAAATCCG ATTATAATAT TGTTGGTGAT
CTAGATTATA ATCTATTTCG AATTATACCA TACTTGGTCG TTCTAATCGG AGCTTTAATT
GGTTTTAATG TATTTGTTGT TCTTTTGCTT GGAACATTAT GCTCTATTCT TGTTGGGGTA
TTGAGCGGAA CAATTCCATT TGCATCGATA TTTACCGTAA TAGCAAGTGG TACTGATGGC
AAAGGTGGTA TCATGAGTAT GTATGATATC ACAGCAATTT CTATAGTGGT TGCAGGTATT
ATAGGCTTAG TGAAGGAAAA TGGAGGTATT GATTATATCT TATCCTTAAT TAAGAAGCGA
GTAAAAACAA ACAAAGGGGC TCAACTTGGA ATAGCAGCGT TAAGTTCCTT AGTAGATATT
TCTACTGCAA ATAATACCAT TGCGATAGTT ATGGCTGGAC CAATTGCCAA GGATATTTCG
GAAGAGTTTG ATATTGAACC AAAAAGAACA GCTGCATTAC TTGATATCTT TACCTCTGTT
TGGCAAGGAA TCATTCCATA TGGAGCACAG CTTTTGTATG CGAGTGCAGG TGCAGCAGCT
GTTGGTATTG CAATTACACC AATGGAAATA ATACCATATC TCTTCTATCC TATACTTATG
GGGGTATGTG GAATTCTTGC AATCCTTTTT AGTAAATCCA CACGATCAAA TAAAAATTGA
|
|---|
| Protein sequence | MRQGKLSGLL PIGVFLILFI GSGILFQNFY AMPAIVAFLI ALAVALIQNP KKSLNDKLRV
VTQSMGDENV MTMCLIFILA GAFSGAVQAA GGVESTVNFG LSIMPPSIAV AGIFIIACFI
SVAMGTSVGT IAALTPIAVG VGDKTGFSMA MCIGAVVCGA MFGDNLSMIS DTTIAATKTQ
GCEMKDKFKE NFWIVLPAAI VTIILFLLLA GKSDYNIVGD LDYNLFRIIP YLVVLIGALI
GFNVFVVLLL GTLCSILVGV LSGTIPFASI FTVIASGTDG KGGIMSMYDI TAISIVVAGI
IGLVKENGGI DYILSLIKKR VKTNKGAQLG IAALSSLVDI STANNTIAIV MAGPIAKDIS
EEFDIEPKRT AALLDIFTSV WQGIIPYGAQ LLYASAGAAA VGIAITPMEI IPYLFYPILM
GVCGILAILF SKSTRSNKN
|
|---|
| |