Gene Cphy_1007 details

Gene Information

• Locus tag: Cphy_1007
• ID: 5743947
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 1272518
• End bp: 1273297
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 641292114
• Product: ABC-2 type transporter
• Protein accession: YP_001558126
• Protein GI: 160879158

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.200229
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCGTT TTATTACGCA ATCTTGGCTT AATTTTAAAG GCCAAAAATC AGTATTTAAT 
TTAGCAGAGT TTCTTTGCTT TGATACTGGA TATCCACTGA TAACTTTAAT TTTTTATTGT 
GTTTTAGCAG GATATAGTTT TCATACAACG GACTTAACTC GCTGGGTAGT CGGAAATTCT 
TTTTTACTTT GTACGAATAC CTGCATCTTT TCCCTTGGTT CTTCTTTTAC AGGAGAACGT 
TATCATGGAA GAATACGCTC AATCATCGTA GCTCCGAGGA ATAAGTTAGT GATTGTGTTA 
GAAAAAGGGT TGTTTTCAGG TATCATTGCG ATTATAACTG TTTTTCTTGG ATTCTTGGTT 
GGCAGTGGTA TCTTTCGAGT AGATTTTAGT AGGATTCATC TTTTTTCATT CTTTTTAATA 
ATAGTTATAG GAATGTTTTC AGCTACTGGA TTTGGGCTGT TACTTTCTAC CTTTGGCCTC 
ATCACAGATC AAATGCACCT GGTGCTTAAT CTTTCTTCCT ATGCTTTAAT GATTTTTTGT 
GGTGTTAATT TTCCGGTATC ACAATTATCC TATGGAGCGC GCCTTTTATC CAATTGTCTT 
CCGTTAACTA GGAGTATAAA GGCAGCTAAT TTATTGTTTG AGGTAACAAA AGGGGCGGAA 
GTCATTCGTT TGTTACTTGA AGAGCTATTG ATAGGTGGTA TTTATTTTAT TGCTGCTTTT 
TTCCTAATTC GTATGGTTGA AAAAGTTGCG ATTAAAAAAG CAACTTTTGA GGTATTTTAA 

 

Protein sequence

MKRFITQSWL NFKGQKSVFN LAEFLCFDTG YPLITLIFYC VLAGYSFHTT DLTRWVVGNS 
FLLCTNTCIF SLGSSFTGER YHGRIRSIIV APRNKLVIVL EKGLFSGIIA IITVFLGFLV 
GSGIFRVDFS RIHLFSFFLI IVIGMFSATG FGLLLSTFGL ITDQMHLVLN LSSYALMIFC 
GVNFPVSQLS YGARLLSNCL PLTRSIKAAN LLFEVTKGAE VIRLLLEELL IGGIYFIAAF 
FLIRMVEKVA IKKATFEVF