Gene Cphy_0979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0979 
Symbol 
ID5743919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1246284 
End bp1247090 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content32% 
IMG OID641292086 
Producthypothetical protein 
Protein accessionYP_001558098 
Protein GI160879130 
COG category[R] General function prediction only 
COG ID[COG4587] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAGCA AACCATTAGG AGATATTTAT ATATCGTTTG CAAAAAAGAA ATTTTTAAGT 
TGCATGGCAT ACCGATTCGA TCATTGGATG ACGATTTTTA GTTCAGTTTT TACTGTTATA
ATTTCCTTTT ATCTATACAG CGCATTGTAC TCTGGAAATA CAGAATTTGA TGGAATAACT
CTATCGATGG TCGCGACCAA TCTTATTATT TCTTTCGTAA TTGGGGATGC ATTTGCTATG
GATGATGAAT TTTTACATAA TAAGATCAAT AACGGTACCA TTGCAAATGA ATTTTTAAGA
CCGGTGAATT TTAAGCTACG TATATTAGCA GAAGATTTGG GTCAGACATT TTATAATTTG
ATATTTCGAA GTGGTCCTGC ATTCTTGCTT ACAGTATTGT TGATTGATAT GGAGCCACCA
AAGAGTATTG TTTATCTAAT GCTAAGTATC ATTGCTTTAT TATTCGGATA TTTTGTCTGT
TGGAATTTAA GTTTTATCGT TCAGACTTTA GCATTTTGGA TAATTAATGT TTGGAGTATA
TCTACTATAA AAGGTGTTCT TTTTAGTTTA CTTTCTGGAT GTATTTTACC ACTATGGTTT
TTACCAGATA CTGTTCGTAC AATTGCCTCT TTCACTCCAT TTAGCTCCAT TTATTTTGGT
ACAGTTCAGA TTTATCTCGG ATTGGTAAAT GAACGAGAAA TAGTAGCAAT CTATTTCAAG
CAATGGATTT GGATTGTATT ATTATATCTC ATAGGAGATT TCTTATGGAG GCGTGGTCAA
AAGAAATTGA TTGTGCAAGG GGGGTAG
 
Protein sequence
MSSKPLGDIY ISFAKKKFLS CMAYRFDHWM TIFSSVFTVI ISFYLYSALY SGNTEFDGIT 
LSMVATNLII SFVIGDAFAM DDEFLHNKIN NGTIANEFLR PVNFKLRILA EDLGQTFYNL
IFRSGPAFLL TVLLIDMEPP KSIVYLMLSI IALLFGYFVC WNLSFIVQTL AFWIINVWSI
STIKGVLFSL LSGCILPLWF LPDTVRTIAS FTPFSSIYFG TVQIYLGLVN EREIVAIYFK
QWIWIVLLYL IGDFLWRRGQ KKLIVQGG