| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0928 |
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| Symbol | |
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| ID | 5741800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 1182272 |
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| End bp | 1184572 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641292039 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001558051 |
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| Protein GI | 160879083 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.197774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATCTA TATCCATGAA AGAAAAAATT CTTTTATCAT TCAAGAAACA TAATTTTTAC
TATCGCATTC TTCTTCCATT TTCTATCTTC AGCATTACTA TAGTCTGCCT AATGTCAGGA
ATAAATTGGT ACCGAATAGA AAACGAATAT AATAAAAAGA TTATTGAATC CAACCAACAG
TTTCTAAAGA GGGCTTCTCA GCTAAGTGAT CAATATCTTT ATGGTAATTT CACTTCCATT
TTAAATAGTT CTTTTTTGGA CGGTTTTAAG ACTTCAAAAA TGGACCGTTT TATTACATAT
GGAGATAGAC TAAAACCTTC TGAATTTCTA AATTTACACC AGAGTATAAC TAATATCTGT
GCTCAAAACT CCTCAGTAAT TCAGGTTTCT TTATATCAGT ATGCATCAGA CCTTTATCTA
GATAGTTTTG AAGGTCTTGT TTATAATGCT TCCAAAAGAC CATTGAATAG TGATCAATCA
CTTAAGAATT ACCTATCCAC CATTTCCGGG CATGAGAAAG GGATTCTTTA CTACACTTCT
GGTCCCAATT CTTTTCCTGT AAAGAAAATA GTTATGCTAC GTTCCGTTCC CTTATATACC
AATTTTACAA ACGGAAGTGG ATTTATTGCA ATTACTTTGG ATACTAATAG CCTTTGGGAA
CAATTAAATA TGTCCACTAC CTCCAAAGAT GATTCTTTTT TTATTTTAGA CTCTGAAAAA
AAGCTTCTCT TGGAAAAAAG CCCATCCTCT ATTTCCTATG AATATCTAAA AAGTGTGTCG
GACTCCACCG AAATTTCTGC ATTTTTAACT TATAACGGTA TTCGTTACCG TTTGGATGAA
ATTGTTTCTG AGGATTCCGG ATGGCATTAT ATCTCCTGTG TCCCAATAAA TATACTCAAT
GCAGAGGTTA GAGCACAGCA TCAGCTTACT CTTATGATTA CACTAATTTG CATCCTTCTT
TCACTAGTTA TCGTTCAAAG AATTTCAAGT AAAGCCTATC AACCGATTGT AAATCTTCGA
AATCGTCTGG CAAAAAATTA TTCATCTATT GAAAGCAAAG ATGATCTTTC TATAATTGAA
GGAACCTTTT CTTTTTTGGA GAATCAGGTA GATGATATAC AGAAAATGCT CCATAAAAAT
AGCCAAGTCA TACTCTACAA ACTTTTTATG GATATTCTCA ATAAAAAAGA ACTTTCCGAT
AGCCAACTTT TACACAAGTT AGAGCTTAGT GGAATTCATA TTACCCAAAG TAATTATTGT
CTGCTTTTAA TCGAATTTGA TAAACATGTA TTCTACAAAC TTTCTCTTGA ACAACGGGAA
TATTTGATTA CAAAGTCCGA TTCCCTACTG AAAGATTTCC TTAGCGAACC TATCATTCAG
ACCGCAGAGG CCCAGCCTGA TAATCGAATT GCTATTTTGC TAAATCTGAA TCCTGATAAT
TATTTATCAC TTACAGAACA ACTAGAGCTT CTTCCAGACC ATTTATTTGA CATTTTTCAT
ATAAAAATAA ATCTGGCGTT CTCCGCTCCT GTTCTCTATC TTTCAGAAAT ATCCAAGGTG
TATTCTCGAA TTTCCGAATA CATGAAATAT TTTTTTCTTT TCGGCTATGG GAATATATTT
ACAGATGAAC TGATCCACAA ACTTGATAAT ACTTCCTATT CTTTTTCACT GCAAGATTAC
CAGCAAATCG AACGAATGGT GAGAAATGGT ACTCCGGATG AATTTTCATT TCTTATGGAA
AGTTATCAAC AAATCATAGA ATCAGGGGAG TGTTCCTATC AGGAAGCGAA CAATTTTTTA
ATTCAGACTT ACAGAATTGC ATTTAATATA GGGAAAGAGT TGGGGTTATT TGATGATCCA
CATAAAAAAG ATCAAATATT AAATGATTTT AATCATGCAA TAAACTTTGC ACACTCTATT
GAGTGTATCT GTCTGGTCGT TCAGATGTGC CATGAATTTC TTAATGAAGA AGTTCTTAAT
GCGGATTCTT ATTTTATCCA ACAGATACTT GAGTACATTA AAACTCATCA GAAAGAAGAA
ATTTCCCTCT CTTTAGTTGC TCAAGTTTTT CATGTCAGTA CCGGACATTT AAGCCGCTTG
TTCAAAAGTG TGACCAACCA GAATTTTTCA GCCTATGTTA TAAACATTAA ATTAGAAACT
GCAGCTGAAC TTCTGAATAA TGAACCTGAA AAAAGTATTT CAAACATAGC TGCTGAACTT
GGATATTATA CCCCGGCTTA TTTTACTAGA TTATTTAAAG AAAAGTTTGG CGTTACACCT
TCTCAGTTTC GTAAAAAGTA A
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| Protein sequence | MISISMKEKI LLSFKKHNFY YRILLPFSIF SITIVCLMSG INWYRIENEY NKKIIESNQQ
FLKRASQLSD QYLYGNFTSI LNSSFLDGFK TSKMDRFITY GDRLKPSEFL NLHQSITNIC
AQNSSVIQVS LYQYASDLYL DSFEGLVYNA SKRPLNSDQS LKNYLSTISG HEKGILYYTS
GPNSFPVKKI VMLRSVPLYT NFTNGSGFIA ITLDTNSLWE QLNMSTTSKD DSFFILDSEK
KLLLEKSPSS ISYEYLKSVS DSTEISAFLT YNGIRYRLDE IVSEDSGWHY ISCVPINILN
AEVRAQHQLT LMITLICILL SLVIVQRISS KAYQPIVNLR NRLAKNYSSI ESKDDLSIIE
GTFSFLENQV DDIQKMLHKN SQVILYKLFM DILNKKELSD SQLLHKLELS GIHITQSNYC
LLLIEFDKHV FYKLSLEQRE YLITKSDSLL KDFLSEPIIQ TAEAQPDNRI AILLNLNPDN
YLSLTEQLEL LPDHLFDIFH IKINLAFSAP VLYLSEISKV YSRISEYMKY FFLFGYGNIF
TDELIHKLDN TSYSFSLQDY QQIERMVRNG TPDEFSFLME SYQQIIESGE CSYQEANNFL
IQTYRIAFNI GKELGLFDDP HKKDQILNDF NHAINFAHSI ECICLVVQMC HEFLNEEVLN
ADSYFIQQIL EYIKTHQKEE ISLSLVAQVF HVSTGHLSRL FKSVTNQNFS AYVINIKLET
AAELLNNEPE KSISNIAAEL GYYTPAYFTR LFKEKFGVTP SQFRKK
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