| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0879 |
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| Symbol | |
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| ID | 5741751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1129734 |
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| End bp | 1130480 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641291992 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001558004 |
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| Protein GI | 160879036 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAAATA TTCAATTAAT AATAGAATAC GATGGCTCTC GATATGATGG CTGGCAAAAG
CAGGCTGGAA ATCAGAAGTC TATAACGATT CAGGATAAGT TAGAAGATGT TTTAAATAAA
ATGGAGAACG AAACCGTCAC GGTCATTGGA GCAGCTAGAA CCGAGGCCGG GGTACATGCT
TACAAGCAGG TTGCTAGCTT TATGACAAAT TCAAAGCTAA AGGTTTATGA AATTAAGCAA
TATCTGAATC GCTTTTTACC AAGAGATATT GCTGTCCTAG AGGCATTAGA AGTACCAGAG
AGGTTCCATG CAAGTTTTAA CGCAGGATCC TTTGAGTATG AATATAAAAT ATCCATTGGA
GAAGTACCTT CTGTATTTGA ACGCAAATAT AATTATTATT GCTTTAAACG TCCAGACATT
GCTAAGATGA AGGAAGCAGC CAAATATCTA GTTGGGAAGC ATGATTTCAA AGCTTTTTCA
GATAATAAAA GGATGAAAAA ATCTACCGAG AGAGAAATTT ATTCTTTAGA AATCTATGGG
GATGAGAAAG AAATAGTAAT AACGGTTCAT GGTGATGATT TTTGGCCACA TATGGTACGA
ATTATGGTAG GAACCTTACT TGACGTGGGT CTATCAAAAA TTGAACCAAT GGATATAAAA
AGAATTTTAG AGAGCAAAGA CAGGGATAAA GCTGGCGAGA CCATAGAAGC GAAAGGTCTA
TTTTTAACAG AAGTGCATTA TAAATAA
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| Protein sequence | MRNIQLIIEY DGSRYDGWQK QAGNQKSITI QDKLEDVLNK MENETVTVIG AARTEAGVHA
YKQVASFMTN SKLKVYEIKQ YLNRFLPRDI AVLEALEVPE RFHASFNAGS FEYEYKISIG
EVPSVFERKY NYYCFKRPDI AKMKEAAKYL VGKHDFKAFS DNKRMKKSTE REIYSLEIYG
DEKEIVITVH GDDFWPHMVR IMVGTLLDVG LSKIEPMDIK RILESKDRDK AGETIEAKGL
FLTEVHYK
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