Gene Cphy_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0872 
Symbol 
ID5741744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand+ 
Start bp1119304 
End bp1119924 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content35% 
IMG OID641291985 
Productmethyltransferase type 12 
Protein accessionYP_001557997 
Protein GI160879029 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00554243 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGTCG TAAAATCAAC CGTAGAACAC TATGATTTAT TAATAGAGTC AGATAACGAT 
CCAGTTCATG ATCCTAGTTT GCTGCAGGAG TATATGAACA GATGGGACGG CGACAAATTC 
TTAAGTGAAT TAAAGCTTAA CCAAACACTT TCTGTTTTAG AAATCGGTGT CGGAACGGGC 
AGGCTTGCGT TAAGAGTACT AAAGCTTGGT TGTAAACGGT TTATTGGAAT TGATTTATCA 
CAAAAGACAA TTGATAGAGC CAAAGATAAT CTAAGAGATT ATTCTAACTA CACCCTCATA 
GTCGGAGACT ATCTGGATGA TTGCCTTGAT TGTAAAGTTG ATTTGATTTA TAGTTCACTA 
ACATTTTTTC ATGTGAAAGA GAAGGCAGCA GCAATTAAGA AAACGAATGA GTTACTAAAT 
CCAGGTGGCA GATTTGTAGT GTCGATAGAA AAGGATACTC AAGAGTATTT TGACTATGGC 
GACTATAAAG TTAAGATGTA TCCGGATAAT AGAAAACATA TAATCGGACT ATTAGAAAGC 
TATGAATTTA CCATTGAGAA CATTTCAGAA GTAGATTTTG CTTATATAAT ATCGGCGGTT 
AAAGAAAACG ATATTTCTTA A
 
Protein sequence
MNVVKSTVEH YDLLIESDND PVHDPSLLQE YMNRWDGDKF LSELKLNQTL SVLEIGVGTG 
RLALRVLKLG CKRFIGIDLS QKTIDRAKDN LRDYSNYTLI VGDYLDDCLD CKVDLIYSSL 
TFFHVKEKAA AIKKTNELLN PGGRFVVSIE KDTQEYFDYG DYKVKMYPDN RKHIIGLLES 
YEFTIENISE VDFAYIISAV KENDIS