Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0709 |
Symbol | |
ID | 5743825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 919637 |
End bp | 920515 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641291821 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001557835 |
Protein GI | 160878867 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAATC TTTTTGAAAA AAGTGATGTG TTAAATGCAC CAGTAGAAGC ATTTTATTTT GATACCCGAT ATGATAACTT TCCGATTCGT CCTCATTGGC ATTATTTTAT GGAAATCATC TACATGTTAG ATGGTAGGGC ACAAATAAAT GCGGGTGAAG AATCTCATCT GCTCTTCGCC GGTGATATGG CAATCTTTCA TCCCAAAATG GTACATGCAA TTTATGCGGT TACTTCGGAA CCAATTCACT ATGCGGTTTT AAAATTTGAT ATTAACCGAT TGCAATTGAC TTCAAAGTAT GCACCTAAGA TGAGGATATT GTTTCAGAGT GCAGAAGGGA ATCCTGCATG CCCCATCTAT CTTTCTGCTA ATAGTTTAAT TCATGTAGAT ATCCGTTCAC AAATCCTCCC TTGTATCCAT GAAATAAAAG AAAAAGATTA TGGTTATGAC GTAATTCTTC AAGCAAAACT TTACATATTA CTTTCAGAAA TTATTCGAAT TTGGAGAAAA AATGGGTTCG ATACGTCTAA ATTATTACCT TCTAATGACG AAGTAGATAC AATTTACACC ATTACAGAAT ATATGGATGC TCATTGTACC GAACCAATTA AGGTGGTTGA TATTGCAGCG AAGTGCAATA TGAGTTATAG CCATTTTGCA AAGAGTTTTC GCGCTATCTA TGGGCAGACC TGTAAAGATT TTTTAGAATA TCTTCGTGTT TGCAAAGCAG AAAATTATCT ACTTTTTACA GAATATGACC TTACCTATAT CAGCCAAGAA ACCGGATTTT GTGACTGCAG CCACCTTATT AAAGCATTTA AAGATGTGAA AGGAATTACG CCAAAACAAT ATCGCCTACA GCATAAGGTA ACCAGATAA
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Protein sequence | MQNLFEKSDV LNAPVEAFYF DTRYDNFPIR PHWHYFMEII YMLDGRAQIN AGEESHLLFA GDMAIFHPKM VHAIYAVTSE PIHYAVLKFD INRLQLTSKY APKMRILFQS AEGNPACPIY LSANSLIHVD IRSQILPCIH EIKEKDYGYD VILQAKLYIL LSEIIRIWRK NGFDTSKLLP SNDEVDTIYT ITEYMDAHCT EPIKVVDIAA KCNMSYSHFA KSFRAIYGQT CKDFLEYLRV CKAENYLLFT EYDLTYISQE TGFCDCSHLI KAFKDVKGIT PKQYRLQHKV TR
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