Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0569 |
Symbol | |
ID | 5743483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 733282 |
End bp | 734193 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641291681 |
Product | hypothetical protein |
Protein accession | YP_001557695 |
Protein GI | 160878727 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00106206 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGC CAGTATTAGT AATTATGGCT GCTGGAATGG GAAGCAGATA TGGTGGATTA AAGCAAATTG ATTCAGTGGA TGAGCAGGGA CATATTATTA TAGATTTCTC AATTTTTGAT GCAATCAAAG CAGGATTTAA GAAAGTTATC TTTATTATTA AGAAAGAAAT AGAAGAAGAC TTTAAAGAAG TGATTGGAAA TCGCATTGAA AAGATTGTAG AAGTTGAATA TGTTTATCAA GAAATCGCCA AAGTACCAGA GAACTTTACT GTCCCAGAAA GTAGAGTAAA ACCATGGGGA ACTGGTCATG CAATCTTATG TTGCATGGAT AAGATTCAAG GACCATTTGC AGTAATTAAC GCAGATGATT TTTATGGTAG AGAAGCTTTT GTAAAAATTT ATGATTTCCT AAGTTCTATA GAACAAATTA ATCTTTATTC TATGGTGGGA TATCAATTAA AAAATACATT GACAGAACAT GGCTCTGTTG CAAGAGGGGT ATGTAATGTG AATGAGGAAG GTTTCTTAAC TAAGATTACG GAGAGAACAA AGATTGAAAA ATTCCCTGAC GGTGCTAAGT ATTATGAGAG TGAAACAGAT ACTTGGGAAG AAATATCATT TGACAGTACG GTCTCTATGA ATCTATGGGG ATTTCAAGCA AATATTATGG CGGAACTAAA AGAAGAGTTT GATACTTTCT TGAAGACAGA GGTTGCTAAT AACCCAGAGA AAAGTGAGTT TTTCTTACCA ACCGTTGTTC AGCATATGAT TGAAAGTCAG AAGGTGCAGG TAAAGGTATT ACATTCTAAG GATCAATGGT TTGGTGTTAC GTATAAAGAA GATAAAGAAG TCGTACTAAA AGAGATAGCA AAGTTAAAAG AACAAGGAAT TTACCCGGAA AATCTATGGT AA
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Protein sequence | MEKPVLVIMA AGMGSRYGGL KQIDSVDEQG HIIIDFSIFD AIKAGFKKVI FIIKKEIEED FKEVIGNRIE KIVEVEYVYQ EIAKVPENFT VPESRVKPWG TGHAILCCMD KIQGPFAVIN ADDFYGREAF VKIYDFLSSI EQINLYSMVG YQLKNTLTEH GSVARGVCNV NEEGFLTKIT ERTKIEKFPD GAKYYESETD TWEEISFDST VSMNLWGFQA NIMAELKEEF DTFLKTEVAN NPEKSEFFLP TVVQHMIESQ KVQVKVLHSK DQWFGVTYKE DKEVVLKEIA KLKEQGIYPE NLW
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