| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0561 |
|---|
| Symbol | |
|---|
| ID | 5743475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 721033 |
|---|
| End bp | 722073 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641291673 |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_001557687 |
|---|
| Protein GI | 160878719 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAA GAAAGACTTC ATTTTATTAT CTAGTGTTTA CGTTGCTACT ACTTATTACG
ATTATTGTCA CAGCATCAGT TGGTTCAGCC AACATAACAA TATATGATAG TTTAAAGGTC
CTTCTAAGTA AAATACCGAT TATTAGAAAG TTAATAGAAA CTTCGGATAT ACCTAAAAAT
TATGTTACGA TTATTTGGAA TATTCGAATA CCTAGGATTT TACTCTCTGG TTTAAGCGGA
GCCTCACTTG CGTTAGTAGG GGCATGTTTT CAAGGATTAT TTCGTAATCC ACTTGCAGAC
CCACAGATAC TTGGCATTTC CTCTGGTGCA GCTCTTGGAG CTACGATAGC TACACTAAGT
GGTATGACGA TATCATTTTT TGGTCTGGGT GTGATAGGGG CATTTGCCTT TGTTGGAGCT
CTACTTACTG TTTTCTTAGT ATACCAAATT GCGTTTACTG GAAGTACTGG TTCAGTTACT
CATATTGTGC TAACTGGTAC AGCGATTAGT TCTATGTTGT CTGCTATGAT TTCCTTATTA
ATGAGTATTA GAAGAGAGCA GATAGAAAAG GTTTATATGT GGACTCTTGG AAGCTTTTCT
GCAGCTAGCA TGAAGAAAGT CGGATTTCTT CTCCTGTTTT TTGTTGTCTG TGCTACGATA
ATTATTGTGT ATGCGAGAGA ACTAAACATT ATAGCGGCAG GTGAGGAAAC TGCAGAAAGT
CTTGGTATTG ATACATTGAA AGTGAAGAGA ACTCTTATCA TAGTTGGTTC ACTTTTGGTA
GCCGCTTGCG TCTCGGTTTG TGGTATTATA GGCTTTGTCG GTTTAATTAT ACCTCATATG
ATACGATTGC TACTTGGTCC AAGACACGAG AGATTATTGC CATTTAGTTG TATCTTTGGT
GCCTTTTTCT TAATTGTTTG TGATACTTTA GCAAGAACCT TAAGAGCACC TGGAGAATTA
CCAGTCGGAG TTATTACCGC ATTATTTGGA GCACCATATT TCTTATTATT ACTATATCGT
GATAAGAAAA GGATGGTGTA A
|
|---|
| Protein sequence | MNKRKTSFYY LVFTLLLLIT IIVTASVGSA NITIYDSLKV LLSKIPIIRK LIETSDIPKN
YVTIIWNIRI PRILLSGLSG ASLALVGACF QGLFRNPLAD PQILGISSGA ALGATIATLS
GMTISFFGLG VIGAFAFVGA LLTVFLVYQI AFTGSTGSVT HIVLTGTAIS SMLSAMISLL
MSIRREQIEK VYMWTLGSFS AASMKKVGFL LLFFVVCATI IIVYARELNI IAAGEETAES
LGIDTLKVKR TLIIVGSLLV AACVSVCGII GFVGLIIPHM IRLLLGPRHE RLLPFSCIFG
AFFLIVCDTL ARTLRAPGEL PVGVITALFG APYFLLLLYR DKKRMV
|
|---|
| |