Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0530 |
Symbol | |
ID | 5743444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 672748 |
End bp | 674523 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641291642 |
Product | Beta-galactosidase |
Protein accession | YP_001557656 |
Protein GI | 160878688 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAAGG AAGAAAACGG AACTTTTCAA GAATCAATCC ATAAAGTAAA TTACGAAGAT TGTTATAGAA GTAAAATGAT AAAGAGTGAT AGTTTATTTC TTGATTATTA TAGAGAGAAA GAATATTTAA ACGGAACATG GAATTATGGT ATCGATCAAT ATGATAACTG TCTTAGAGCA AAGTGGTTCG AAGAGGTTTA TTTTGATGAA GACGGAAGAC AGTATCCAGT GGATTTTAGT TTCGATACCT GGGAGACGAT GAAGGTACCA TCCTGTTGGA ATACACAATC AGAGAAATAT TTCCATTATG AAGGCAGCGT AGTATATACC CGAACCTTTC GCTACAAAAA TAATGGGGAA AAAAGAGTCT TTCTTAAGTT TGGTGCAGTT AATTACGAAG CAAAAGTATT TGTAAATAAA CAATTCGTGG GAATGCATCA AGGAGGATCT ACACCATTTG TAATTGAAGT GACAGGTATT TTAGCAGAAG ATAACCGAAT TATGGTTGTT GCGAATAATA CAAGAAAGCG GACCAATGTC CCTTGTGAAA ACACGGATTG GTTTAATTAT GGCGGAATTT ATCGTGATGT TGAGATAATT CGTATGCCAG AATCCTTTAT TAAAGATGCA TTTTTATATC TTGTTCCAGA TGGAAGTTAT AATAAGATTG CAGGAAAAAT CACTCTGGAG GGAAGCAATG CCAACAGCAG TGTTCAATTA GAAATTAAAG AATTACAGAT AAATGAAGTG TTTGAAGTGA AAGATGGTGT GGTTGAATTT AACCTAGAGG CACATCCTGA ACTTTGGTCC ACTGAAAATC CAAAACTTTA TGATGTGGTT ATACGTTACG GAGAGGACTA CGTCAAAGAA AAAATAGGAT TCCGTGAAGT TAAAGTTTAT GGAACAGATA TCTATTTAAA CGGAAAGAAG ATATTGTTAA AAGGTATCTG TGCTCATGAA GAAAGTGTTA TCAATGGCAA GGCAGTAACA GAAGATGAAA TTAGAGAGAA TTTCCGCCTG GCAAAAGAGA TGAACTGCAA TTACATGAGA CTAGCACATT ATCCACATAC AGAAAAGGCA GCACGAATTG CAGATGAAAT TGGTATTATG CTATGGGAAG AGATTCCAGT TTATTGGGCA ATCGAATTCG AGAATCCAGA TACCTATGCA GATGCATCTA ATCAGCTTTC TGAATTGATT TTAAGAGACC GAAATAGAGC AAGCGTTATT ATCTGGTCAG TAGGAAATGA AAATGCAGAT TCTGATTCAC GTCTAAGATT TATGAGTAAT TTAGTGAATA AAGCAAGAGA GCTAGACTCT ACAAGAATGA TATCCGCAGC TTGCCTAGTA GACCTTAAGA AACTTTGTAT TGCTGATCGT TTGGCTGACG TTATTGATAT TATAGGTCTT AACGAATATT TTGGCTGGTA TGAACCGGAT TTTTCAAAAT TAATAAAGAT ATTTGAAAAT AGTAAACCAG ATAAGCCTGT AATTATCAGT GAATTTGGAG CAGATGCAAG AGCTGGTGCA AGGGGAAGCA TGGATGATCT ATACACAGAA GACAGACAGC TTAAGATTTA CCGTGATCAA ATTGATACAC TTAGTAAAAT AAGCTATGTA AAAGGAATTA GCCCTTGGAT TTTGTTCGAT TTTAGGTGTC CGAGAAGACT TCACACGATG CAAAATTATT ATAATCTTAA AGGACTACTC TCTGCTGATA AAAGCTATAA AAAGCCTGCG TATTTCTTAA TGAAAGAGTT CTATAGAAAT TGGTAA
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Protein sequence | MQKEENGTFQ ESIHKVNYED CYRSKMIKSD SLFLDYYREK EYLNGTWNYG IDQYDNCLRA KWFEEVYFDE DGRQYPVDFS FDTWETMKVP SCWNTQSEKY FHYEGSVVYT RTFRYKNNGE KRVFLKFGAV NYEAKVFVNK QFVGMHQGGS TPFVIEVTGI LAEDNRIMVV ANNTRKRTNV PCENTDWFNY GGIYRDVEII RMPESFIKDA FLYLVPDGSY NKIAGKITLE GSNANSSVQL EIKELQINEV FEVKDGVVEF NLEAHPELWS TENPKLYDVV IRYGEDYVKE KIGFREVKVY GTDIYLNGKK ILLKGICAHE ESVINGKAVT EDEIRENFRL AKEMNCNYMR LAHYPHTEKA ARIADEIGIM LWEEIPVYWA IEFENPDTYA DASNQLSELI LRDRNRASVI IWSVGNENAD SDSRLRFMSN LVNKARELDS TRMISAACLV DLKKLCIADR LADVIDIIGL NEYFGWYEPD FSKLIKIFEN SKPDKPVIIS EFGADARAGA RGSMDDLYTE DRQLKIYRDQ IDTLSKISYV KGISPWILFD FRCPRRLHTM QNYYNLKGLL SADKSYKKPA YFLMKEFYRN W
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