Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0492 |
Symbol | |
ID | 5743406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 623046 |
End bp | 627716 |
Gene Length | 4671 bp |
Protein Length | 1556 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641291604 |
Product | alginate lyase 2 |
Protein accession | YP_001557618 |
Protein GI | 160878650 |
COG category | [R] General function prediction only |
COG ID | [COG3858] Predicted glycosyl hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATGTA GACATAGTAA GTTAAGAAGG ATAACAGCAC TAATTGTATT GATAGCCATC GTAATTACTG GTATGCCTAA TACCGTCCAT GCACAAGATA AAACTTATAT AATGTACCAG ATAAAAGATG GGGATACAAT TAAGAAAATA GCTGATCGAT ACAATACAAG CATTGACAGC ATTATGAAAT TAAATAATAT AAAAAATTCA AATGTATTTT ATTCCGGAAA AGAAACCAAG GTACCGATAG CCTCGGTAAC TTATGTGGTA AAAAAAGGAG ATACACTTTC AAAGATAGCG AGAACTCACG GTACCACAGT TGATACTATT GCGAAATTAA ATGGAATCAA AGATGAAAAT AAGATACAAA CAGGCCAAAA ACTTATCGTA GTAAAAGAGG AACATGTAGA GAGTACAACT TCTGTAAACA ATGAGGAAAC CTTAGTAAGA ACACAGAAGG AATTATTAAA TGCCCTTGCA TCGAAAAGTT CTACGGTGAT TCGAATTGCT ACTGAAAAAA AGATTACTTT TGAAATTCCA AAAAAGAATT ATAACGCAAA AGTTTTGATT GTAGATGCGA AAAATTCGGA AGTTAAGAAC GAAGGAACAT TTCATCATAT ATTAATTCAA GCCATTAAGA CATCAACCTT TTATGAATAT GGCAGTAAGA ATACCATTAT TATAAAAGCT TCTACAGCAC ATTTGGTAAT GGAAAAGACC GCTGTACCTG GAAAGATTAT TGTGGAAGAT ACGAATAAAG AGCTTACTAT CGATAACTAT ACGAAGAAGC AGATGACACT TCAGACGTCA GATACAGTAT TAACAGTAAA GGCTGAAAAT TCGGTGGAAG TGAAACAAGG TATCGTAAAG AAGGAAAGCA AGTTGAATCA AATAAAACCA ACAGTAGCAC CAACTACGAA GCCGACCGCA GTACCTACTA CGAAACCAAC CGTAGTACCT ACAATTACTC CAACTGGTAC TCCAAATCCA ACTACTGCTA TGCCAGAACC AACGAGCATA CCAACGGATA TACCGACACC GGTGCCGACA ACGATACCGC CGACTAATGT ACCAACAATA AGTCCGACAC CAATACCACA GCTACCTTCT GATATTGTTG ATTTTTCAAC CTGGAAATTA CAACTTCCGA TAGCAGGAGA ATCTGGTTTA TCAGTAAAAG AAGTAGGCCC TGAGGACTTA AACAACGGTT TTGTTCATGA TGAATACTTC TATGTTGATA CAGATGGTGG TATTGTGTTC CACTGCCCTG TGGATGGATT TAAGACAGCA AACACGAATT ATGCGAGAAC CGAGCTTCGA GAGATTATCG ATGGAAAAAA TCCAGCGGTG AACTGGGGAT TTCAAGGAAC CCATATTTTA AGGACCAGTG AGAGTGTTGA GAAAGTATCA TCCAATGGAA GGACTGTAGT TTCTCAGATT CATGGAATCT ATCCAAACGG TGATAATGGA CCGGTGCTAG TTAAGGTACA GTATGAACAT GATTTAAAAG CGGTTGTTGT TATGTTAAAA ACAGGAACAG CGCCTAATGC TGCAGAGCAA AGGGGATATT TTTATGGTGT AGAATTAGGC CAGCGCTTTG AAACTGAAAT TAAATGTGTG GAGGGTGTTT TATATGTAAC CATCCAAAGC GAAGGAAGAA AAGAGACCTA TACCATTAAC TTCATGGAAA TGGACCCTAC ATGGGGAGGG CAGCTTGGTT ATTTCAAAGT AGGAAACTAC ATACAGGATA GTGATGTAAA TTATGAAAAC GAGGCTGCTA CTGTTAAGGT TTATTCCATC GAGACATTTC ATGATGACTC TTATGTGGAG CAGGTTCCAA TTGAAGGACT TGCAATGAAA CAGACAGAGG TGACCTTAGA TGTTGGTGAA ACCATCGGAT TAGAACCTGT TTTTACACCA GTGGACACCA CGAATAAGGC AGTAACTTGG AATGTAGTCA GCGGACAGAA TAAGGTAGCG GTGAACAAGC ATGGAGTTGT TACTGCAATA GCAGAGGGTG AAGCAATTGT TAGAGCAACT AGCAAAGAGA ATAACAGTGT TTTTGCTGAG TGCGTCTTGA CCGTAACATT AGATTCGAAA CAAGAGGTAA TTGCTCTTTA TGAGCAGGAC TTTGGTAAAG ATATGCCTTA TGATATCGCT AATGCAAGTG AGTGGCTACT TAGCACGACA GGATATGGTA AGGTGGAAGT AGAACAAGAG GGAGATAATT TTATATTAAA GCTAACCGAT ACGGATATGG CTGGAACAGC AAAATCCTTG GTTTATTTTC CAGAGCAATA TGGAACTACT ACGCTTAGCT ATCGGATTCG AGTGGATGAA ATTTTAGTAA AAGACCCAGA GGGAGCAAAA GCTCAGGCAT CTTATCTCTA CTTACCAGTA GGAGGCCAGG ATGGTTTCAT GAATGCAGCG GATGAGATGT TCCGTATTAG AAATGGTGCA ACTTATCAAG GAGGAACACT AATTAATCAT CGTTGGCAGC TATCCCACTC TTATTCGGAT GCAACAATGA ATTATGCAGC TACCGAGTTT AAGATTGGAG AATGGAAAGA AATCACGGTC GTTATAACAC CTGATAACGG TACAGCAAAT GCGAATAAAA CTGATGTCTA TGTAGATGGC TATCGAGTCG CAAGTCAGAT GAACAACAAT AAGATCAATA GCTATATTAA TCAAGCAGAG TTTTATACTG GTACGAAGGA TCAGGTTAGT TTCAGTATTG ATGATGTGAG AATTTACTCC GGAGAAAAAG TAAGGGAAGC AGAAGATGCT CTGCCACCAA CGAGCATTAC CCTTGGAACT GCACCATCTA CGATGGCAAC TGGTGACTCC TTTAAGCTTA CAACATACAT TACACCGGCA GATGCCAAAG AAGCGGTAAC TTATCTAATT ACAAGTGGAG CAGACCTCGT ATCTGTAAGT AAGGATGGGT TGGTAACAGC AATCAAGCCA GGAACTGCAA CCGTTCGTGT ACACAGTACC GGACACGAAG AAATCTTTTC AGAAATTACG CTAACTATCG TGGAGGAGAG CTCTATCGTA CGTGTAGAGT CCATTGAGCT ACCTGAAAAA ATCATCAATT TAGCAGAAGG AGAAGAGAAA CAGCTATTTC CAATCCTACT TCCGCTAAAT GCGACGGAGC AAAAGGTAAG CTATGAAGTG ATTCACGGTT TTGATGTAAT TAGTGTTTCT GCAGAAGGTA TCTTAAGTAC TAAGAATACA GGTGTCGCTA CTGTGCGTAT TACATGTATG GACAACAGCC GATTGTATGT AGATTGTGAT ATTTCTGTTA CAAGGAAGAC AAATGAGGGA ACAGTGATAT TTAGAGATAC GTTTGATGAA ACACTGGACT TAACAAAATG GACACTGGCT ACCTCTAATT TTAACGATAC AATCACGGAA GTAAAGGACG GATCACTTCA TCTGGTAGAT AACAATACAA GTGGTCAGCC AAGAGCCTAT GTCTCTTTTG AACCACAGGC CTCAACCTTT AGCATCGAGT TTAAGGTAAA AATGTCTGCT GATACCATAT ACAACTCGAA CAAAGTATCT GCCCTATGTG TTGCATTTGG TACTGGTACG ATAACTAGTA CAGCAAGTGA AACATTCCGA TTTAAAACCT CTGCTGATGT GGCAAATGGA GAAGTTACGA ATCGTAGGTT TGTATATAGC AAGGAAGAAG GCGCTAGCGG ATTTTATGAC TTGAGTAAGA ACTATGAACT GGAGGAGTGG TATACTGTAA AATTAGTGAC TACACCAAAC GATGGTTCTA CGAGAGCGAA TACAACAGAT ATCTATATTA ACGATACATT AATGATAGAA GGTGCCGCGA ATAAAACAAA CGCCGCCATC ATTGATAAAT TAATATTCCA AACAGGAACA GCCGATTTAA CAGAGTTCTG GATTGATGAT GTTACGATAA CAGCTGGTAA TTCTAGTAGT GAAACACCTG GTGAAAATCC AGGATACCAA TTAGTATACG AAGAAGATTT TGAAAATGGC TCTTTACCAG AAGCAAGTTC CACTACAAAC CCTTCCATTC GTCCATCGTG GAAGCTTACG ACAGGGGAAA GCTCTCTCTC TGAGATAGCT CTTGATACAA TAGACAATTC TGCACTGAAA TTGTTTGATT CTGATACGAG CAGTCAACCA AAGGCACAAC TTATATTTAA CCCTATCACC GATAAGGCAA CGATTGAATT TCGCTTAAAA ATGGAAAGTG ATAAAGTTTA TATCGACGGA ACGAATCAAA AAGCTTCTGC ATTTTGCGTT GTGTTTGGTT CTACTTCGGA TGGAAATATT GCAACAAAAG CGAATGAAAT GTTCCGATTT AAAACAACCG CAACAGTAGA TACAGCCTCT GGCTCTGCAA TTTCTTATCG TAAGTATCAA TATGAAAATT CAGATGGAAA ATCCTTTGTA ACATTGGATG CACCGAGCTA TGAATTGAAT ACTTACTACA CAATAAAATT CGTTATTACG TTAGGAGATA CTCAAAAGAC AGAGATTTAT ATTGATGGAG TGAAAGTTGC AGAAGGTTAC CATAAGAAGA ATACGAATAC GGTTGATACG ATATTATTTC AAAGTGGATC AATGGATTTA ACAAATTATT GGATTGACAA TGTTAAGATT TATCAGGGTC ATAATGTATA A
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Protein sequence | MGCRHSKLRR ITALIVLIAI VITGMPNTVH AQDKTYIMYQ IKDGDTIKKI ADRYNTSIDS IMKLNNIKNS NVFYSGKETK VPIASVTYVV KKGDTLSKIA RTHGTTVDTI AKLNGIKDEN KIQTGQKLIV VKEEHVESTT SVNNEETLVR TQKELLNALA SKSSTVIRIA TEKKITFEIP KKNYNAKVLI VDAKNSEVKN EGTFHHILIQ AIKTSTFYEY GSKNTIIIKA STAHLVMEKT AVPGKIIVED TNKELTIDNY TKKQMTLQTS DTVLTVKAEN SVEVKQGIVK KESKLNQIKP TVAPTTKPTA VPTTKPTVVP TITPTGTPNP TTAMPEPTSI PTDIPTPVPT TIPPTNVPTI SPTPIPQLPS DIVDFSTWKL QLPIAGESGL SVKEVGPEDL NNGFVHDEYF YVDTDGGIVF HCPVDGFKTA NTNYARTELR EIIDGKNPAV NWGFQGTHIL RTSESVEKVS SNGRTVVSQI HGIYPNGDNG PVLVKVQYEH DLKAVVVMLK TGTAPNAAEQ RGYFYGVELG QRFETEIKCV EGVLYVTIQS EGRKETYTIN FMEMDPTWGG QLGYFKVGNY IQDSDVNYEN EAATVKVYSI ETFHDDSYVE QVPIEGLAMK QTEVTLDVGE TIGLEPVFTP VDTTNKAVTW NVVSGQNKVA VNKHGVVTAI AEGEAIVRAT SKENNSVFAE CVLTVTLDSK QEVIALYEQD FGKDMPYDIA NASEWLLSTT GYGKVEVEQE GDNFILKLTD TDMAGTAKSL VYFPEQYGTT TLSYRIRVDE ILVKDPEGAK AQASYLYLPV GGQDGFMNAA DEMFRIRNGA TYQGGTLINH RWQLSHSYSD ATMNYAATEF KIGEWKEITV VITPDNGTAN ANKTDVYVDG YRVASQMNNN KINSYINQAE FYTGTKDQVS FSIDDVRIYS GEKVREAEDA LPPTSITLGT APSTMATGDS FKLTTYITPA DAKEAVTYLI TSGADLVSVS KDGLVTAIKP GTATVRVHST GHEEIFSEIT LTIVEESSIV RVESIELPEK IINLAEGEEK QLFPILLPLN ATEQKVSYEV IHGFDVISVS AEGILSTKNT GVATVRITCM DNSRLYVDCD ISVTRKTNEG TVIFRDTFDE TLDLTKWTLA TSNFNDTITE VKDGSLHLVD NNTSGQPRAY VSFEPQASTF SIEFKVKMSA DTIYNSNKVS ALCVAFGTGT ITSTASETFR FKTSADVANG EVTNRRFVYS KEEGASGFYD LSKNYELEEW YTVKLVTTPN DGSTRANTTD IYINDTLMIE GAANKTNAAI IDKLIFQTGT ADLTEFWIDD VTITAGNSSS ETPGENPGYQ LVYEEDFENG SLPEASSTTN PSIRPSWKLT TGESSLSEIA LDTIDNSALK LFDSDTSSQP KAQLIFNPIT DKATIEFRLK MESDKVYIDG TNQKASAFCV VFGSTSDGNI ATKANEMFRF KTTATVDTAS GSAISYRKYQ YENSDGKSFV TLDAPSYELN TYYTIKFVIT LGDTQKTEIY IDGVKVAEGY HKKNTNTVDT ILFQSGSMDL TNYWIDNVKI YQGHNV
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