| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0338 |
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| Symbol | |
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| ID | 5742184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 425701 |
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| End bp | 427869 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641291428 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001557464 |
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| Protein GI | 160878496 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTT TCGAACAATT AAAAGAAGAG TTAGGAATTA AACTGGAACA GGTCGAAGCT
ACTGTAAAGC TCATCGATGA GGGAAATACG ATACCTTTTA TTGCTAGATA TCGAAAAGAG
GTTACCGGTT CTTTAAATGA TGAGGTACTA CGAAGTCTAT CAGAGCGTTT AACCTATCTG
CGAAACTTGG AAGAGAAGAA GGCTTCTGTA CTTGCAAGTA TCGAAGAACA GGGAAAATTA
ACAGAAGAGT TAAAGGCACA GATTGAAGCT GCGGCAACCT TAGTAGTAGT AGAAGACTTA
TATCGCCCAT ATCGTCCAAA ACGTAGAACC AGAGCGACAA TTGCAAAAGA GAAGGGATTG
GAGCCACTGG CAGAAATCAT CATTGCTCAG GAAATTTCTA GGGATATCTT AGAATTAGCA
GAAGACTATG TATCGGAAGA GAAGGAAGTA AGTTCTGCTA AAGACGCTGT AGCAGGAGCA
CTGGATATTA TTGCAGAAAG CATCTCTGAT GAAGCGGATT ATCGTATCCA CATACGTAAG
CTTACCTTTG AAGAAGGAAG TATAACTTCC GCCGCAAAGG ATGCAGAAGC CGAATCTGTA
TATGAACTTT ATTATGAATA TAGTGAAAAA ATTTCTAAGG TAGCGGGTCA CAGAGTTTTA
GCCTTAAATC GCGGTGAAAA TGAGAAATTT CTTACAGTAA AGATTACAGC GCCAACTGAG
AAAATAATGA ATTATCTTAA GGGTAAAGTG ATAAAGAGAG ATAATCCACA TACCAATGAT
TATCTTGTAG TAGCAATTGC AGATAGTTAT GACCGTTTAA TCGCACCTGC AATTGAACGT
GAGATCAGAA ACGATTTGAC GGAAAAAGCA GAGGATGGTG CAATTGTAGT CTTTGGCCAG
AACTTAACTC AAGTATTAAT GCAGCCTCCA ATTGCTGGAC AAGTTGTACT TGGATGGGAT
CCAGCGTTTC GTACCGGTTG TAAGCTGGCT GTAGTAGATG CAACAGGAAA GGTATTAGAT
ACTGTAGTAA TCTATCCGAC AGCACCACAA AATAAGGTAG AGGAAGCGAA GACAGTTTTA
AAGAAATTAT TTAAGAAATA TCAGATTACC TTAATTTCTG TTGGAAATGG TACTGCTTCC
AGAGAATCCG AGCAGATTAT TGTAGACTTA TTAAAAGAAA TTACTGAGCC AATCTCTTAT
GTAATTGTAA ATGAGGCTGG AGCATCGGTA TATTCAGCAA GTAAGTTAGC AACCGAGGAG
TTTCCTAATT TTGATGTTGG ACAAAGAAGT GCCGCTTCTA TTGCAAGAAG AATTCAGGAC
CCATTAGCTG AGTTAGTAAA GATTGATCCT AAATCGATCG GCGTAGGTCA ATATCAACAC
GATATGAACC AAAAGAAACT AAGCGAAGCA TTAGGCGGAG TTGTAGAAGA TTGTGTAAAT
AAAGTTGGAG TAGATCTAAA TACTGCATCA GCTTCCTTAC TTGAATATAT TTCTGGAATT
TCAAAACCAA TCGCTAAGAA TATTGTTATT TACCGTGAGG AAAATGGAAA GTTTAAGAAT
CGAAAGCAAT TATTAAAGGT TGCGAAACTT GGGCCAAAGG CTTTTGAACA ATGTGCAGGA
TTTTTACGAA TTAATGATGG AGATAATCCT CTGGATGGAA CTAGTGTGCA TCCAGAATCT
TATGAAGCAG CTGAAAAACT TCTAGAGATG CTTGAAGTGA AAGATTTAAG AGAGTTACAA
GCGAAAGCAA AAGAAGTAGA TGCTAAAAGA GAACAATCGA TTAGCCAGAA AGTTAAGGAT
AAAAAGAAGA TGGCACAGGA GCTTTCGATT GGTGAAATTA CTTTAACTGA TATCATTAAG
GAATTAGAAA AACCAAGCAG AGACCCAAGA GAAGAGATGC CAAAACCAAT CTTAAGAACC
GATGTTCTTG ATATGAAAGA CTTAACTGAG GGTATGATTT TAAAGGGTAC TGTACGTAAT
GTCATTGATT TTGGAGCATT TGTTGATATT GGAGTTCATC AAGATGGTTT GGTTCATATA
TCACAATTGT CAAAGCAGAA ATTTGTTAAG CACCCACTTG ATATCGTTAG TGTAGGAGAT
ATAGTGGAAG TAAAAGTTTT AAGTGTAGAT GTATCGAAAA AAAGAATACA ACTCTCTATG
ATTTTATAA
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| Protein sequence | MKIFEQLKEE LGIKLEQVEA TVKLIDEGNT IPFIARYRKE VTGSLNDEVL RSLSERLTYL
RNLEEKKASV LASIEEQGKL TEELKAQIEA AATLVVVEDL YRPYRPKRRT RATIAKEKGL
EPLAEIIIAQ EISRDILELA EDYVSEEKEV SSAKDAVAGA LDIIAESISD EADYRIHIRK
LTFEEGSITS AAKDAEAESV YELYYEYSEK ISKVAGHRVL ALNRGENEKF LTVKITAPTE
KIMNYLKGKV IKRDNPHTND YLVVAIADSY DRLIAPAIER EIRNDLTEKA EDGAIVVFGQ
NLTQVLMQPP IAGQVVLGWD PAFRTGCKLA VVDATGKVLD TVVIYPTAPQ NKVEEAKTVL
KKLFKKYQIT LISVGNGTAS RESEQIIVDL LKEITEPISY VIVNEAGASV YSASKLATEE
FPNFDVGQRS AASIARRIQD PLAELVKIDP KSIGVGQYQH DMNQKKLSEA LGGVVEDCVN
KVGVDLNTAS ASLLEYISGI SKPIAKNIVI YREENGKFKN RKQLLKVAKL GPKAFEQCAG
FLRINDGDNP LDGTSVHPES YEAAEKLLEM LEVKDLRELQ AKAKEVDAKR EQSISQKVKD
KKKMAQELSI GEITLTDIIK ELEKPSRDPR EEMPKPILRT DVLDMKDLTE GMILKGTVRN
VIDFGAFVDI GVHQDGLVHI SQLSKQKFVK HPLDIVSVGD IVEVKVLSVD VSKKRIQLSM
IL
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