Gene Cphy_0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0306 
Symbol 
ID5744229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp383872 
End bp385713 
Gene Length1842 bp 
Protein Length613 aa 
Translation table11 
GC content37% 
IMG OID641291396 
Productflagellar hook-associated protein FlgK 
Protein accessionYP_001557432 
Protein GI160878464 
COG category[N] Cell motility 
COG ID[COG1256] Flagellar hook-associated protein 
TIGRFAM ID[TIGR02492] flagellar hook-associated protein FlgK 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATCTA CATTTTTTGG ACTTTCCATA GGAAATAGTG GATTATATGC TTCGCAGGCA 
GGTTTAAATA CCACTGCGCA TAATATAGCA AATATTGAAA CAGAGGGTTT CTCAAGACAA
GTGGCAAAAC AACAAGCTGG AACAGCTCTT CGAGTAAATA GTTCCTATGG TATGGTTGGT
ACTGGTGTTG ATATCAAGGG TGTAACTCAG ATACGTGACT CGTACTATGA TTTGAAATAT
ATGAAGAATA ACACAATGTA TGGAGCGTAC TCCACCAAAG AGTATTATTT AACCTCCATT
GAGAATTATT TTAATGAAGT TAAGTTGGAA GGGTTTTTGA CTAATTTTGA TAATATGTAC
AATAGCCTCC AGGAATTGAG TAAGCAACCA GAGGACTTAA CCGTACGTAC TCAGGTTACT
AATATGGCTC AAAGTACCTG TGATTATGTA AATTCGCTTT CAACTAGCTT AAGCCGCTTA
CAGGAAGAAT GTAATTTTGA GATTAAAAAT CAAGTAGAAC GCGTGAACTC CTTGGCACAA
CAGATTGCTA TTGTTACGAA GCAAATCAAC ACGATTGAAG TTAATGGTGG TACCGCAAAT
GACCTTAGGG ATCAACGTGC CTTAATGGTG GACGAATTAT CCGGATTTGC AACGGTAAGT
GTCAATGAGC GAATTGTTGG AGATAATGTC GGAGTTACGA GTTATACCGT TAAATTAGAT
GGTCAGACCT TGGTTGACAA CTATGAGGCG AACCAATTAA AAGTCGTTCC AAGAGATACC
AAAGTAAATC AGTTGGATGC GACAGGACTA TTTAATGTTT GCTGGAGTAA TGGACAACCC
GTGGATCTTA ATAGTCCAAC CATGGGCGGA ACGCTTAAAG CGTTGATTCA AGTACGTGAT
GGTAACAATA AGGAAGGTTA TCAGGGAAAA GCAATAGCAA GTGCTGGTGA TACAACAATT
ACAGTGACTT CAACGAATAA AAATAATGTA GAAGATTTAA ACATTGCATC CAATGGTATT
ATTACAATAG GCAATAGAGA GTACCATTAT AATGGATTTG CTGTTACAAA GGATGAAGAT
ACAGGAGAAT TTATCTACGA ATTTTCCCTT GATGAACCAG TTAAAGTGGA TGTGAATGAA
GAAACTGCCC ATATCGGAAA ACAGGTTGAT TATAAAGGAA TCCCGTACTA TATGGCACAG
CTCAATAAAT TTGCTAGAAC CTATGCCAAA GCATTTAATG ATGTACATAA ATCAGGACAG
GATTTAAATG GCGACCAGGG CTTAGATTTC TTTAATGGTG TTGACGTGGT AACAGGTAAG
AACTTTATCT TTGATAAGTC ACCTTCAGAT GAAGGAAATG GTTATTTATT TACCTCTAAG
ACAGGGGCTT ATGCTGGAGA TTATGCGGAT GAACCGAATT TTGCGTCATA TTATTTGCTC
ACTGCCGATA CCTTTGGGGT TACAAAGGCA GTTTATTCGG ACCCTAAAAA GTTGGCGACT
GCATCTTCAA TTGAAAATGG TGTTGCTAAC GCTGATAATG TTCAGAAGTT ACTAGCATTA
AAAGATGACG TTAGAATGTT TGGTCAAGGA AAACCAGCTC AATTTTTCCA AACTCTAGTA
GCAGAGATTG GCATTGATGC GAAACAAGCA AGTAATTTTG CAGAAAACCA AATGAATATT
TTATCAGCAG TTCAGAATCA GAGATTATCC ATCAGTGGTG TAGATCAAGA AGAAGAGGCT
ATGAACTTAG TGCGTTACCA AAAAGCCTAT AACTTATCTG CTAAGGTAAT TTCTATTATG
GATCAGATTT ATGATAGACT CATTAATTAT ATGGGTGCAT AA
 
Protein sequence
MPSTFFGLSI GNSGLYASQA GLNTTAHNIA NIETEGFSRQ VAKQQAGTAL RVNSSYGMVG 
TGVDIKGVTQ IRDSYYDLKY MKNNTMYGAY STKEYYLTSI ENYFNEVKLE GFLTNFDNMY
NSLQELSKQP EDLTVRTQVT NMAQSTCDYV NSLSTSLSRL QEECNFEIKN QVERVNSLAQ
QIAIVTKQIN TIEVNGGTAN DLRDQRALMV DELSGFATVS VNERIVGDNV GVTSYTVKLD
GQTLVDNYEA NQLKVVPRDT KVNQLDATGL FNVCWSNGQP VDLNSPTMGG TLKALIQVRD
GNNKEGYQGK AIASAGDTTI TVTSTNKNNV EDLNIASNGI ITIGNREYHY NGFAVTKDED
TGEFIYEFSL DEPVKVDVNE ETAHIGKQVD YKGIPYYMAQ LNKFARTYAK AFNDVHKSGQ
DLNGDQGLDF FNGVDVVTGK NFIFDKSPSD EGNGYLFTSK TGAYAGDYAD EPNFASYYLL
TADTFGVTKA VYSDPKKLAT ASSIENGVAN ADNVQKLLAL KDDVRMFGQG KPAQFFQTLV
AEIGIDAKQA SNFAENQMNI LSAVQNQRLS ISGVDQEEEA MNLVRYQKAY NLSAKVISIM
DQIYDRLINY MGA