| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0244 |
|---|
| Symbol | |
|---|
| ID | 5745112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 302817 |
|---|
| End bp | 303632 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641291334 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001557370 |
|---|
| Protein GI | 160878402 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG4786] Flagellar basal body rod protein |
|---|
| TIGRFAM ID | [TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.450187 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGAG CACTTTGGAC TGGGGCATCG GGTATGATTT CTCAGCAAAC ATCTTTGGAT
ACCATATCAA ATAATTTATC AAACATTAAT ACTGCTGGAT ATAAAAAGGA GAACGCACAA
TTTTCTTCCT TGTTATATTC TAAAATACAA AGTAAAGTAA CGGATAGTGA AGGAAAAGTA
AAACCTGTTA TAGGACAGGT TGGTTCTGGT GTCAGAGTAA CTGGTATCGT ATCCTCCTTT
ACTCAGGGAA CTTTACAAGA AAGCAACAAT GATTGGGATC TTGCGATTTC AGGTAATGGT
TTATTTTCTG TTCGTGATTC CGATGGCAAT ACCGCATATA CTAGAAATGG TTCCTTCCAT
ATCGCAATAG GTGCAGAAGG AGTTACCTTA GCTTCCGCTG ACGGATATCC GGTATTAAAT
ACAAAGGGAC AGCCAGTTGT ATTTAACAAC AATTGGGATA TCTCGAAAGT AACGATGGAT
GAGTATGGAA ACTTAATGTA TCCTGATGCA AATAATATTG CGCAGCGTAC TGGAATTCAA
ATCGGTCTTA CTCAGTTTGT TAATCCTGCT GGATTAGAGA AAGCCGGTGG AAGTTTATTT
TATGAAACTG AAAGCTCGGG AGCTCCTCTT AAGGAAGTGG AGAATAATAA TCTAAAACAA
AGTAAGATTC ATACTGGATA TCTCGAAGCA TCCAATGTAC AAACTGCGGA TGAAATTGTG
AATTTAATTG TGACACAGAG AGCTTATGAG ATGAATTCCA AAGTAATTAC AGCTGCAGAT
GAGATGTTGC AGCAAGCGAA TAACTTACGT CGTTAA
|
|---|
| Protein sequence | MMRALWTGAS GMISQQTSLD TISNNLSNIN TAGYKKENAQ FSSLLYSKIQ SKVTDSEGKV
KPVIGQVGSG VRVTGIVSSF TQGTLQESNN DWDLAISGNG LFSVRDSDGN TAYTRNGSFH
IAIGAEGVTL ASADGYPVLN TKGQPVVFNN NWDISKVTMD EYGNLMYPDA NNIAQRTGIQ
IGLTQFVNPA GLEKAGGSLF YETESSGAPL KEVENNNLKQ SKIHTGYLEA SNVQTADEIV
NLIVTQRAYE MNSKVITAAD EMLQQANNLR R
|
|---|
| |