| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0224 |
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| Symbol | |
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| ID | 5745092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 276345 |
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| End bp | 278903 |
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| Gene Length | 2559 bp |
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| Protein Length | 852 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641291314 |
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| Product | DEAD_2 domain-containing protein |
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| Protein accession | YP_001557350 |
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| Protein GI | 160878382 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0115724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGATA CTGACTTAAA ATCGATAAAG ATATCTGTTC GTAATCTAGT AGAATTTATA
ATGAAATCAG GGGACTTAGA TAACTCTGTT GGAAAAAGGG ATCCTGATGC CATGCAAGAA
GGCAGCAGGC TACATCGAAA GATTCAGCGA AGAATGGGGC CTGAATATAA GCCAGAAGTG
GCACTTCGTG TTACAGTTCC GGTGTCGAGG GAAGATATCG AATTTGAGCT TATTATTGAA
GGCAGAGCGG ATGGCATTAT TACGAATATA GAGCCTACTA AGGAGGATAA CCCTATTCTG
GAGGAAAAAC CTACTTTAGA GGAAAAACCT ACTTTAGAGG AAAAACCTAT TTTGGAGGGA
AAACCTATTT TGGAGGGAAA TCCTATTTTG GAGGAAAATC CTACTTTGGG GGAACATCAT
CCTTCAGAGG AACATCCTTC AAAGCAGAAT GGGGCAGAAG GTAACATCCA CGTTATCATT
GATGAGATAA AATGTGTTTA TGCGGATATC AGTCAGATTA CTGAGATGAT TCCAGTTCAT
CGTGCACAAG CTTTATGCTA TGCCTATATT TATGCCAAGG AGCGAGTACT GGATACAATA
AGTATTCAGA TTACCTATTG TCATCTTGAA ACTGAGGCAA TAAGAATTTT ATCGGAAGAA
CTTAAGTTTA AGGAACTATC AAACTGGTTC CAGAATTTGA TACAAGAGTA TTGTAAATGG
GCGGCATGGC AGATTAAGTG GATGGAGAGC AGAAATGAAT CCATCAAACA GATTGAATTT
CCTTTTGAAT ATCGCCCTGG ACAAAGAGAT TTAGTGACTG GCGTTTACCG GACCATAATA
AGAGATAAAA AATTATATAT AGAAGCACCA ACGGGAGTTG GAAAAACCAT TTCAACAGTA
TTTCCGACAG TGAAGGCGAT GGGAGAAGGC TTTGTTTCAA AAATCTTTTA TCTGACTGCC
AAGACAATTA CACGTACTGT CGCAGAGGAT ACTTATCAGT TGCTCTTGGA GCGGGGCTTA
TCGATGAAAC TTGTTACGAT AACAGCAAAA GATAAGATTT GTATCTTAGA CAAGCCTAAC
TGTAATCCGG CCGCATGTGA ACGAGCCAAA GGACACTATG ACAGAGTAAA CGATGCAGTT
TTTGATTTAT TAACGAGTGA ATCAAGAATA TCAAGAGAAC TGATTGAGCA GTATGCTATG
AAGCATTGTG TATGCCCATT TGAGATGTGT CTTGATGTGA CATTATGGGC AGATGGCATC
ATATGCGATT ATAACTATGC ATTTGATCCC AATGTGTATT TAAGAAGATT TTTTGAGAAT
GATAAGAAAC AGGATTATGT TTTTTTGATT GACGAGGCTC ATAACTTAGT AGACAGAGCA
AGGGAAATGT ACAGTGCTAT GCTGTATAAA CAGGATTTTT TAACGGTAAA AGGTATTGTA
AAAGATAAGT CGAAGACAAT GGTGAAGAGG CTCGAAGCCT GTAATGAGGT AATGCTTCGG
TTAAAGCGTG GTTGTGATGA CATAGAAGTA TTACAAGATG TGAATGATTT GGTACTGCCT
CTTTTAAGAC TTATGTCAGA GTATGAAGAG TTTTTTAAGG AATATGGTGA TTTTGAAGGC
AGAGAGGTTG TATCACAGCT ATTTTTTGAT CTACGAAAAT TTCTTGCTAT TCATGACATA
TTAGGGGAGG ACTATCTAAT CTATTCCGAC TATGATGAGA GAGGAGAATT TCGTGTAAAG
CTTCTTTGTA TGGATCCTGC AAGAAACTTA TTAACCTGTT TAAATAAGGG AAGGAGTTCC
ATCTTTTTTT CTGCTACATT ATTACCAATT ACGTATTATA AGGAACAGCT TGGCGGTTCC
GAGGAAGATT ATGCTATCTA TGCACCCTCT CCATTTGAAG TTTCAAAAAG GCTGCTCATG
ATAGCAAAAG ATGTCAGTAC AAAATATACA AGGCGGGGTC AAGATGAGTA TGAGAGGATT
GTTTCCTATA TCGAAGGCTT TGTAAATGCA AAGGTAGGGA ATTATTTTGT GTTCTTTCCT
TCTTATCAGA TGTTGCAACA AATCGCCCAA TTAAGCGAAG ATAGAATCCC AAATCTTTTA
TTACAAAAGA CAAGTATGGG AGAACTAGAG AAAGAGGAAT TTTTAGCTGC GTTTGAGGAA
AATCCTACGA ATACGAAGGT TGGCTACTGT GTTATGGGAG GAATCTTTTC AGAAGGAATC
GACTTAAAGA AAGATCGTTT GATTGGTGCG GTGATTGTAG GAACGGGATT ACCGCAGGTT
GGTAACGAAA GAGAATTATT CCGTGGATAT TATGATGATC GAAACGGATC TGGTTTTGAC
CATGCTTACC TTTACCCGGG GATTAATAAA GTACTTCAAT CTGCTGGTAG AGTGATTCGT
ACGGTCGAAG ATAAAGGAGC GATTTTATTG CTTGATGAAC GTTTTTTAAA TTCTCAGTAC
AAAAATCTAT TTCCAAGAGA ATGGGAGCAG TATGATATCG TAAATCAAGA GAAAATGCAG
GAATTATTGG AGGATTTTTG GAGTCAAAAA AACGAATAA
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| Protein sequence | MPDTDLKSIK ISVRNLVEFI MKSGDLDNSV GKRDPDAMQE GSRLHRKIQR RMGPEYKPEV
ALRVTVPVSR EDIEFELIIE GRADGIITNI EPTKEDNPIL EEKPTLEEKP TLEEKPILEG
KPILEGNPIL EENPTLGEHH PSEEHPSKQN GAEGNIHVII DEIKCVYADI SQITEMIPVH
RAQALCYAYI YAKERVLDTI SIQITYCHLE TEAIRILSEE LKFKELSNWF QNLIQEYCKW
AAWQIKWMES RNESIKQIEF PFEYRPGQRD LVTGVYRTII RDKKLYIEAP TGVGKTISTV
FPTVKAMGEG FVSKIFYLTA KTITRTVAED TYQLLLERGL SMKLVTITAK DKICILDKPN
CNPAACERAK GHYDRVNDAV FDLLTSESRI SRELIEQYAM KHCVCPFEMC LDVTLWADGI
ICDYNYAFDP NVYLRRFFEN DKKQDYVFLI DEAHNLVDRA REMYSAMLYK QDFLTVKGIV
KDKSKTMVKR LEACNEVMLR LKRGCDDIEV LQDVNDLVLP LLRLMSEYEE FFKEYGDFEG
REVVSQLFFD LRKFLAIHDI LGEDYLIYSD YDERGEFRVK LLCMDPARNL LTCLNKGRSS
IFFSATLLPI TYYKEQLGGS EEDYAIYAPS PFEVSKRLLM IAKDVSTKYT RRGQDEYERI
VSYIEGFVNA KVGNYFVFFP SYQMLQQIAQ LSEDRIPNLL LQKTSMGELE KEEFLAAFEE
NPTNTKVGYC VMGGIFSEGI DLKKDRLIGA VIVGTGLPQV GNERELFRGY YDDRNGSGFD
HAYLYPGINK VLQSAGRVIR TVEDKGAILL LDERFLNSQY KNLFPREWEQ YDIVNQEKMQ
ELLEDFWSQK NE
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