Gene Cphy_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0220 
Symbol 
ID5745088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp269141 
End bp271306 
Gene Length2166 bp 
Protein Length721 aa 
Translation table11 
GC content38% 
IMG OID641291310 
Productglycoside hydrolase family 3 protein 
Protein accessionYP_001557346 
Protein GI160878378 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGAAGG TAAATGAATC AGTAATCGAA GAATTATTAA GTCAGATGAC CTTAGAAGAA 
AAGATAGGTC TAATTCATGG TAATGGCATC TTTCGTAGTG GTGGGGTGGA ACGCCTTGGC
ATACCTTCCT TGAAGATGTC GGATGGCCCA ATGGGTGTTC GTAGAGAGTT TGAAGACAAT
AGGTGGTTTC TTGCGTGCAA AACGGACGAT TACGTATCTT ATCTTCCGAG CAATAGTGCA
ATAGCAGCTA CATGGAATAA AGATCTTGCC TATACTTCAG GTCAAGTTCT TGGTAGTGAA
GCAAGGGGAA GAGGAAAAGA TGTTATCTTA GCGCCAGGTA TTAATATTAA AAGAAGCCCT
CTCTGTGGTA GGAATTTTGA ATACATGAGC GAGGATCCAA AGCTAATTGA AGAATTAGCA
AGTTTCATGA TTCAAGGGAT ACAGGAGAAT GATGTAGCAG CTTGTGTAAA GCATTTTGCT
GTAAATAATC AAGAGACTGA CCGTTTGGCA GTGGATACAG ATTTAGAGGA TAGAGCATTA
TTTGAAATAT ATTTGCCTGG TTTTAAGGCC GCAATTAAGA ATGGCGAAAG TTATTCCATC
ATGGGAGCAT ACAATAAGTT CCGAGGTGCT CAGTGTTGTG AAAATTCTTA TCTGCTTGGG
ACTATCTTAA GGGAAGAATG GGAATATGAT GGAACCATTA TATCGGATTG GGGTGGTGTC
CATGATACAA AGGCAGCAGC GAATTCACCA CTCGATATTG AGATGGATGT GAAACCTAAT
TTTGATGAAT ATAACATGGC AAATCCGCTT CTTGAGGCGG TTCATAGAAA TGAAATCTCT
GAAGCTGAGA TAGATAAAAA AGTTAGAAAT ATTCTTCGAC TTATGCTTCG ATTAAAGATG
ATTGGAGAAG AGTCAGAACA AAGAGAATCA GGGACTTATA ATATGATTTC ACATCAACAA
GAGATACTTA AGGTAGCGAG GGAATCTATT ATATTATTAA AAAATGAAGA GGATAGACTA
CCTTTAAAGA AAAATATTAA GAAGTTAGCT GTCATTGGGC AAAATGCGAA TATCTTGCAT
GCCGCTGGTG GTGGAAGTGC AGAAGTCAAA GCACTTTATG AAATTTCACC TTTATTAGGA
ATTCGTATGG AACTTGGTGG TAATACGGAA GTCACCTATC GTCCAGGTTA CTATGTATCA
TATCAAAAAG TCTTTGATAT AATTGGATAT CAAGAAACAA GCACTGACGT TATGGCGGAG
AGAGCAAAGA GAAAACAAGT CTGGCTAGAG CTAGAAAAAG AAGGTAAAGA AAAAAGAAAG
GCAGAAGAGA AACGTCTTCG GGAAGAAGCG GTTTTACTTG CAAGAGAAAC GGAGGATGTT
ATTCTTGTTG TAGGATTAGA TCATCATCAA GATATGGAAG GTCGTGATCG TAAAAGATAT
GAATTACCTT ATGCTCAGGA AAAACTAATT GAAGAAGTGC TCGATGCGAA TCCTAATACA
ATCTTGGTTG TTTGTGCAGG ATCACCGGTT TCTATGCAGA AATTCTCCAA TAAAGCTAAA
ACAATCGTTT GGAGCTATTA TAATGGAATG CAAGGTGGTA AAGCTTTAGC AGATGTATTG
TTTGGAATTG TAAATCCATC TGGAAAATTA CCTGAATCGA TGCCAAAGGA GCTAAATGAT
TGCCCAGCAC ATAAATTTGG GGAATTTGGT ACAAAAGGAA GTGTTTATTA TAACGAAGGC
ATTATGGTAG GATATCGTTA TTATGATACG GAAAATATCA CACCAGAATT TTGTTTTGGT
CATGGACTTT CTTATACAAA TTTCACTTAT AAAAATTTAA CAGTAAGAGC AAATAAGGGA
AAAGGCGCAT TCCTAAGTTT TAGTATAAGA AATACAGGGA AGACAGCTGG AGCTGAGACA
ATTCAAGTTT ATGTTTCTGA TCCAGTTTGC AGTGTAAAGC GCCCTATTCA TGAATTAAAA
GGGTTCACCA AAGTTTTTTT ACAGCCGGGA GAGGAAAAAG AATTGATGAT GGAATTAAAG
CCATCTGCCT TTACCTATTA TTGTACCGAG AGTAAGAAAT TTGTATTAGA GGGCGGAGAG
TTCATCATTG AAGTTGGTAG CTCTTCTAGG GATATCAGGT TGAGCAAGAT GGTAAGAATT
GAGTAA
 
Protein sequence
MKKVNESVIE ELLSQMTLEE KIGLIHGNGI FRSGGVERLG IPSLKMSDGP MGVRREFEDN 
RWFLACKTDD YVSYLPSNSA IAATWNKDLA YTSGQVLGSE ARGRGKDVIL APGINIKRSP
LCGRNFEYMS EDPKLIEELA SFMIQGIQEN DVAACVKHFA VNNQETDRLA VDTDLEDRAL
FEIYLPGFKA AIKNGESYSI MGAYNKFRGA QCCENSYLLG TILREEWEYD GTIISDWGGV
HDTKAAANSP LDIEMDVKPN FDEYNMANPL LEAVHRNEIS EAEIDKKVRN ILRLMLRLKM
IGEESEQRES GTYNMISHQQ EILKVARESI ILLKNEEDRL PLKKNIKKLA VIGQNANILH
AAGGGSAEVK ALYEISPLLG IRMELGGNTE VTYRPGYYVS YQKVFDIIGY QETSTDVMAE
RAKRKQVWLE LEKEGKEKRK AEEKRLREEA VLLARETEDV ILVVGLDHHQ DMEGRDRKRY
ELPYAQEKLI EEVLDANPNT ILVVCAGSPV SMQKFSNKAK TIVWSYYNGM QGGKALADVL
FGIVNPSGKL PESMPKELND CPAHKFGEFG TKGSVYYNEG IMVGYRYYDT ENITPEFCFG
HGLSYTNFTY KNLTVRANKG KGAFLSFSIR NTGKTAGAET IQVYVSDPVC SVKRPIHELK
GFTKVFLQPG EEKELMMELK PSAFTYYCTE SKKFVLEGGE FIIEVGSSSR DIRLSKMVRI
E