| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0183 |
|---|
| Symbol | |
|---|
| ID | 5745051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 229100 |
|---|
| End bp | 229969 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641291273 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001557309 |
|---|
| Protein GI | 160878341 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1533] DNA repair photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCACTATA AAGAAGCGAA AGGAATTCTA TCGAGTACCA ATGGAATGAA TTTATATAGG
GGCTGTACTC ATGGCTGTAT CTATTGCGAT GCTAGAAGTA AGTGTTACCA GATGGACCAT
GAGTTTGAAG ATATCGAAGT AAAGATAAAT GCACCGACGT TATTGGAAAG TGCTCTTCGT
AGCAAGAGAA AAAAGTGTAT GATAGGAACT GGTGCAATGA GTGATCCCTA TCTTTCTCTA
GAGCCTGAAT TAAAGCTAAC TAGAACCTGC TTATCTTTAA TTAATCAATA CGGGTTTGGT
CTTAGCATTC AAACAAAATC AAACCGGATC CTTCGTGATA TTGATCTCTT AAAAAGTATT
CATGAAAAAT CAAAGTGTGT CGTTCAGATT ACCCTAACTA CCTATGACGA AGAGATATGC
AAAATCATTG AACCGGGGGT ATGTACCACT AGAGAACGGT TTGAAGTGCT ATTAAAAATG
AAAGAGAATA ACATACCAAC GGTAGTATGG CTTGATCCAA TCTTACCATT TATTACGGAT
ACAGAAGAAA ATTTAAGAGG TATCTTAAAT TACTGCGTAG AAGCCAAGGT ATATGGAATC
ATTTGCTTTG GAATGGGACT AACGTTAAGA GAAGGAAATC GAGAATATTT TTATCAACAA
TTAGACAAAC ATTTTCCGGG GCTAAAAAAA CGATACCAAG AAACCTATGG CTATGCCTAC
GAGATAATGA GTAAACATAA TGATAAACTT ATGAAAATTT TCTATGATAT TTGCCAGAAC
AATCATATCG TATGTGACAA CAAAAAAGTT TTTCAATATC TTCATGAATA TGAGGAGAAA
AATAAGACGG AGCAGTTGAG TTTATTCTAG
|
|---|
| Protein sequence | MHYKEAKGIL SSTNGMNLYR GCTHGCIYCD ARSKCYQMDH EFEDIEVKIN APTLLESALR
SKRKKCMIGT GAMSDPYLSL EPELKLTRTC LSLINQYGFG LSIQTKSNRI LRDIDLLKSI
HEKSKCVVQI TLTTYDEEIC KIIEPGVCTT RERFEVLLKM KENNIPTVVW LDPILPFITD
TEENLRGILN YCVEAKVYGI ICFGMGLTLR EGNREYFYQQ LDKHFPGLKK RYQETYGYAY
EIMSKHNDKL MKIFYDICQN NHIVCDNKKV FQYLHEYEEK NKTEQLSLF
|
|---|
| |