Gene Cphy_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0170 
Symbol 
ID5745038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand+ 
Start bp214132 
End bp214602 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content35% 
IMG OID641291260 
ProductDNA repair protein RadC 
Protein accessionYP_001557296 
Protein GI160878328 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA ATGTTTATAA TACCATGCTA AATGAGGAAA CAAGGCATAA TGAATTAAAA 
ATAGAAAAAA GTATTATTTG TGAGGATAAC AATAAGTTAG AATCACCGTC TGAGATTCAA 
AAACTGATGA AAGAGCAATT TCAGATTCAT AAGAAGGCAG AGGAATATGT TTATTTAGTT 
TCACTGGATA TGAAATGTAA CCCTCTGGGG ATCTTTGAGC TATCGCATGG TACGGTGAAT 
AGCTCTCTGA TTATGCCGAG AGAAATATTT ATACGTGCGC TACTTTCCGG TGCAGTTGGG 
ATTATTATCG TACATAATCA TCCATCCTCT GATATTACAC CAAGCAAACA GGATTTGCTG 
GTAACAGAGA AAATAGCGCA AGCTGGGAAT ATGATTGGAG TAGAATTGCT TGATCATATT 
ATTATTGGAG GAAATGAATA TTGTTCCTTA AAAGAGATGG GAGTTCTATA G
 
Protein sequence
MKINVYNTML NEETRHNELK IEKSIICEDN NKLESPSEIQ KLMKEQFQIH KKAEEYVYLV 
SLDMKCNPLG IFELSHGTVN SSLIMPREIF IRALLSGAVG IIIVHNHPSS DITPSKQDLL 
VTEKIAQAGN MIGVELLDHI IIGGNEYCSL KEMGVL