| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0130 |
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| Symbol | |
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| ID | 5744280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 172888 |
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| End bp | 173892 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641291218 |
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| Product | patatin |
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| Protein accession | YP_001557258 |
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| Protein GI | 160878290 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3621] Patatin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000566689 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAGA AAAAAGTGTT AGCTATTGAC GGCGGAGGAA TGAAGGGCAT TGTCTCCGCT
GTTTTGCTAC GCAGTTTAGA GGATAGGCTA CAATATCATA GCAATAATTA CAAAGCAAGG
ATTGCAGACT ATTTTGACTT AATAGCAGGA ACTAGTACGG GATCAATATT AACAGCACTC
TATTTGTTTC CAAATGAGCG GGGAGAATCA AAATTTTCTG CGAAAGAAGT ATTAGAGAGC
TATTATGAAT ACGGAGAGTA CATATTTAAG AGACAAAAAT TTTATCCATT CTGGGGACCT
AAGTATACAA ATAAGTATTT AGAGGAGATG TTACTAAAGT ATTTTGGAGA CGCAACCTTA
GGAAGTCTTC GTAAACCTTG TTTAATGACC TCCTATGATA CAACAACTCG AAGTGCAGTA
TTCTTTAATT CAGTCACAGG AAGAAAGGAT GAAAATCGGA ATTATCTCTT AAGGGATGCA
ATATTGGCTT CAACGGCAGC TCCAACATAT TTTCCGCCAA GCTGTTTTCA CGCAAAGGAT
AATTGCTATA ACTGTCTAAT TGATGGAGGT GTTTTTGCTA ATAATCCAAC ACTTTGTGCA
TTAATTGAAG CAATGAAACT ACCAGGATGT GACGGGATTG GCGATACGAT TTGCCTATCG
GTTGGAAATG TAAAGAATAC GAAGTCCTAT ACCTATCAAA AAGTACGTAG ATTCGGGCTT
TTGCAATGGG CAGTGCCAAT CTTTGATATT CTTATGGACG CCAGCGAACA AACAGTAGAT
TATCAATTGA AAAAAATATA TAAATCCGTC AATCATCAGC AATATTATTA CCGTATGGTT
CTTAATACAG AAGAAGAGAT ACCAAAGATG GACGATTGCT CAAAAGAAGC AGTACATAAA
TTAACTCTTT ATGGTGAAAA GTTAGCAAAC CGAGAGAAAT ATCGTATCGA TGAGCTTGCG
AAGCGCTTAG TAATGGAGAA AGATAACGAT AACTTTGTAT TCTAA
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| Protein sequence | MSKKKVLAID GGGMKGIVSA VLLRSLEDRL QYHSNNYKAR IADYFDLIAG TSTGSILTAL
YLFPNERGES KFSAKEVLES YYEYGEYIFK RQKFYPFWGP KYTNKYLEEM LLKYFGDATL
GSLRKPCLMT SYDTTTRSAV FFNSVTGRKD ENRNYLLRDA ILASTAAPTY FPPSCFHAKD
NCYNCLIDGG VFANNPTLCA LIEAMKLPGC DGIGDTICLS VGNVKNTKSY TYQKVRRFGL
LQWAVPIFDI LMDASEQTVD YQLKKIYKSV NHQQYYYRMV LNTEEEIPKM DDCSKEAVHK
LTLYGEKLAN REKYRIDELA KRLVMEKDND NFVF
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