| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0126 |
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| Symbol | |
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| ID | 5744276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 169161 |
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| End bp | 169955 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641291214 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001557254 |
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| Protein GI | 160878286 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000150331 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTGGTG AAATGGATAG AAAGCGCAAC ATAAAACTTA TCATAAGCTA CGATGGGACA
AATTATAGTG GTTGGCAGAG AATTCCCAAA GCAGCAAATG GTGATCATTC TATTCAGGGG
TTACTAGAAG AATTTTTATC TAAGGTTTTG CTAGAACCAA TTAAGCTGAT TGGCTCAGGC
CGCACAGATA CAGGAGTTCA TGCTCTTGGA CAGGTGGCAA ATTTTTATTC GCGCTCCAAT
CTCGACGTAA ATATTATAAG ACAAAAGATG AATCAAGTTC TTCCGGAGGA TATTAAGATA
CTACAAGCGA ACGAAGTGGA CTTAAATTTT CATTCCCGCT TTGATGCGGT AGAGAAAATC
TATCAGTATA TCATAGATAC CAAAGAACGG GAAAGTGTAT TTTTTCGTAA ATATTCATAT
TCTTGTGGTA AGGATTTGGA TATTGAAGCA ATGAGGCAAG CTGCAAAATT ACTCATTGGC
ACGATGGATT ATAAGAGCTT CTGTACAGAT CGTAAGGATG GTAAGTCGAC TATCCGGACG
ATATCTGAGA TAACGATAGA AGAACTACGA CAGAATAGAA ATCAACAGGG TATTATTTTT
ACGTTTCGTG GGAATGGATT TTTACATCAC ATGATACGTA TCATTTCTGG AACACTGTTG
GAGGTTGGGA CACAAGAGAG AAGTGTGGAA AGTGTTAGGC AGGCTATTTT GGGGAAAAAG
AGAGAATATG CCGGGATAAC ACTGTATCCG CAAGGGTTAT TTTTAAAACA AGTCATTTAT
GATAAAAATA GTTAG
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| Protein sequence | MPGEMDRKRN IKLIISYDGT NYSGWQRIPK AANGDHSIQG LLEEFLSKVL LEPIKLIGSG
RTDTGVHALG QVANFYSRSN LDVNIIRQKM NQVLPEDIKI LQANEVDLNF HSRFDAVEKI
YQYIIDTKER ESVFFRKYSY SCGKDLDIEA MRQAAKLLIG TMDYKSFCTD RKDGKSTIRT
ISEITIEELR QNRNQQGIIF TFRGNGFLHH MIRIISGTLL EVGTQERSVE SVRQAILGKK
REYAGITLYP QGLFLKQVIY DKNS
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