Gene Cphy_0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0101 
Symbol 
ID5744251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp135190 
End bp136272 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content36% 
IMG OID641291190 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001557230 
Protein GI160878262 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTAG TAAATATTCC GGTAGCTCAA GTTGTGTCTG GAATGATTGT TGCGGAGGAT 
GTGTATAATA GCGGGAACGA ACGTATCCTT TCTCGCAATA CGATGGTGAC CACAAAAAGT
ATTACGAAAC TAAAACTTCA TGCAATTAAA GAGATTTTTG TTTACATACC AAATACTTTA
GTGAAGAAAC AGACCACCAA ACCATCAGAG CATATCACTG CTTTAAAAAA TTCCGAAGAA
TTTAAAAAAT TCAAAAAGTT TTATTTGGGT AGTATTCTAA CTTTAAAAGA TTCTTTTTCA
TCCTTAACTG GGACATCTTC TCTTCCCTAT GATGAAAATA AACTGCTAGA TTCAGTGGAA
CAGCTTTTAA AGGAATGTCG AAGTTCTTTA AGAACTTTTG ATATGTTACA ATGCATTCGA
GATTTAGATG ACCAAATCTA TGTACATTCT CTAAATGTAG CGCTGATTTG CTTTTCCTTT
GCTACATGGT TAAATTTTAA TGCACATGAT GCAGAACAGC TCATGCTTGC TGGACTATTA
CATGACATCG GTAAACTTAA ACTACCAAAG GATATCATTC AGAAACCAGC AGCACTCAAT
AAAAAAGAGC TCGAACACGT ACATCAGCAC CCCGTGACGG GATATGATCT TGTGAAAGAT
AGGAAAATTG ATCCACGTGT TAAGAAAGCT ATTCTCATGC ATCACGAGCG TTGTGATGGT
AGTGGCTATC CGAATAAACT TTCCTCGAAA GACATCTCTC CTTTTGGAAA AATATTAGCG
ATAGCTGATG TGTATGATGC AATGACTGCT AAGCGTGTAT ATCGTAAAGA AATTTGTCCT
TTTGATGTTG TTGAAAATTT TGAAAAAGAA GGATTCCAAA AATACGATGC TGCCTACCTT
CTTCCTTTTC TTGAAGGGCT CGCGCAGTGT TATATTAATG CATCTGTGCG TCTTAGTAAT
TCCTTAGTTG GAGAAGTCGT AATGATTAAT AAAAACAAAC TATCCCGCCC GGTCGTAAAA
GTAGACGAGC AGTTCATTGA TTTATCTAAA CACAAAGAAC TTAGGATATC TTCTATTCTT
TAA
 
Protein sequence
MNVVNIPVAQ VVSGMIVAED VYNSGNERIL SRNTMVTTKS ITKLKLHAIK EIFVYIPNTL 
VKKQTTKPSE HITALKNSEE FKKFKKFYLG SILTLKDSFS SLTGTSSLPY DENKLLDSVE
QLLKECRSSL RTFDMLQCIR DLDDQIYVHS LNVALICFSF ATWLNFNAHD AEQLMLAGLL
HDIGKLKLPK DIIQKPAALN KKELEHVHQH PVTGYDLVKD RKIDPRVKKA ILMHHERCDG
SGYPNKLSSK DISPFGKILA IADVYDAMTA KRVYRKEICP FDVVENFEKE GFQKYDAAYL
LPFLEGLAQC YINASVRLSN SLVGEVVMIN KNKLSRPVVK VDEQFIDLSK HKELRISSIL