Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0084 |
Symbol | |
ID | 5745011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 112892 |
End bp | 113914 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641291173 |
Product | D-alanine--D-alanine ligase |
Protein accession | YP_001557213 |
Protein GI | 160878245 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGTAG TAGTTTTGGC CGGAGGATTG AGTCCGGAAA GAGAGGTATC ATTAAGTTCT GGAAGTAAAA TTGCAAATGC GCTAATGGAA AAGGGATACG AAGTATTATT ACTTGACTTA TATCTAGGAA TTAAGGATGT AACTAATATA GATTCCCTAT TTCGTAAAAT GGAGGATCAA AATCCATATC AGTATCAAGT TCCTAAGGAA GAACCTAACC TTACGAAACT GAAAGAGGAT TCCGGAAATG GTGGTATATT GATTGGAGAA AATGTCTTGT TGTTATGCCA ATATGCAGAT AAAGTATTTT TGGCACTGCA TGGTTCTATC GGTGAAAATG GTCAGCTGCA GGCTATGTTT GATATCTATG GAATTTCCTA TACAGGAAGT GGATACATAG GAAGCTTACT TGCTATGGAT AAAGGATTAT CTAAAGTCAT AATGCAAAAG CATGGAATTG AGACGCCGGA TTATATTGTT GCGGATTTAA CAGAGGAACA AGAATTAGAA AAAACGTTAA TGCTTCCTTG TGTAATTAAA CCATTAAGCT GCGGTTCCAG TGTTGGGGTA TCCATAGTAA GAAGTCAAGA GGAATTAGGG AAGGCTCTTG ATTATGCGAA AAAGTATGAA AATAAAGTGT TAATTGAAGA ACTCATAGTA GGAAGGGAGT TTTCTGTTGG TATATTAAAT CATCATGCTC TTCCTTTAAT AGAGATTATA CCAAAGACGG GATTCTACGA CTATACGAAT AAATATCAGG CGGGAATGGC GACGGAAGTA TGTCCTGCAC AATTAGAGGA CGAAATCAGT ATAAAGATGC AGGAGGCAGC ATTAAAAGTT CATGAGGTAT TACAACTTGG CTTTTATTCC AGAGTGGATT TCTTATTAAA AGAAGATGGA AGTTTTTATT GCCTTGAGGC GAATACTTTA CCTGGTATGA CTCCAACCAG TTTATTACCA CAAGAGGCAG CAGCAATAGG AATATCGTAT TCTAAGCTAT GCGAACTAAT TTTATTAGGA TAA
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Protein sequence | MKVVVLAGGL SPEREVSLSS GSKIANALME KGYEVLLLDL YLGIKDVTNI DSLFRKMEDQ NPYQYQVPKE EPNLTKLKED SGNGGILIGE NVLLLCQYAD KVFLALHGSI GENGQLQAMF DIYGISYTGS GYIGSLLAMD KGLSKVIMQK HGIETPDYIV ADLTEEQELE KTLMLPCVIK PLSCGSSVGV SIVRSQEELG KALDYAKKYE NKVLIEELIV GREFSVGILN HHALPLIEII PKTGFYDYTN KYQAGMATEV CPAQLEDEIS IKMQEAALKV HEVLQLGFYS RVDFLLKEDG SFYCLEANTL PGMTPTSLLP QEAAAIGISY SKLCELILLG
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