Gene Cphy_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0040 
Symbol 
ID5744960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp56324 
End bp58066 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content33% 
IMG OID641291122 
ProductFHA domain-containing protein 
Protein accessionYP_001557169 
Protein GI160878201 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGAAAAG AAGATATCCG TTCGGAATGG AAACGGGACA TGTATCATAA CTATTTGATT 
TTCAATGGAA GAGGAGAGGA GAGGGCGTCT TTTCAGGAGA AGATGCTGGA ACATAATAAA
ATTGAAGGAA TACTATCTTT TCAAGTTCAT TCCATCGATA ATCATAAACA ATTTCATTAT
GAAGTTACAG GATACCAAGC GATTTCTTGT ATATCTGAAA AGGTTCCTCT AAGGCTAAGT
CAAGTAACAA TGCTTCTTAA TCATCTGTTA GCAGTTTTAA AAGATGCAAA ATCGTATCTT
TTAGATACCA AGGATTTTGT GTTGTTACCA GAATACACGT TTATCCATTT GCCGGATTAT
AAATTAGGTT TATGTTATTA TCCGGGGTAT CATGTTCCGC TTCAGGAACA GCTGGTTGCA
TTTTTAGAAT TTTTAATGGG GAGTGTAGAT TATCAGGATA AGGAAGCGGT ACTATTTGTG
TATTCACTTT ATATGAAGAG TAAGGAAGAT AGTATCACGA TACAAGAACT TAAGTCTTTT
ATGGAGGAAC TGGAAGTAAA AGATAAATCA GATACGCTAT ATATGGAAAA TGGATTAGAA
TCGCAAGGTA AACTGGATAA AGTGAAAGAA CCCCAAAGTA ATAGAGAGCC TTATCAAAGC
AAAAATACCA TAAAGCAGCC ATCTAATTTT AATAAACATA ATGAAGAAAA GAAGAATCAG
AAGCTTAAGG AATCTTTGGC GAATCCATCT CGAAGAAATC TTTTACAATA TAAAGTGACT
TCTTTATTAG CAGATACAAA AGAAAGAATA CTTGGGAAAG AAAATGAAAA CGGAGCAAGT
AAGAAATATG GTAATCAAAA GAAAGAAACA AAGAAGGAAC ATAAATATCC CTTTGTAAAA
GAAAAGCTGG AGCAGGAAGA AGAAATCCTA TACTATCCTT TCTTTTGCTA TGCTTTATTT
GCAGTACTAT TTATTGTATG TATCGGAATT TTCCTATACA CTTATCAAAA GGGATTTTTA
TATCAATCCT TAAAGAAAAA GATAGATGGA TTAAAGTTAA TCTCTTTACT TTCTGTTATG
GGAGTCATAT TGGGTTATGG TTATTTGAAA ATATTTGCGA AAGAAAGAAA GCTAAGTCGC
ATTATAACAA GAACTACCTA TCAAATGCCA GATAAGGAAG ATTTATTTTC TAATTCTGTA
TCTTCAGAAG ATAATAGCTT GATAGAAAAT AGTTATAGAA TACATAAGCA AGACAATAAT
CTGAATTTTA ATAATCTTTC TAATTTTACA TGGGAAAATA ATGAATCCCC TATGATTTAT
GGAGAGGATT CATCTTCTGA TTATTCGGGA GAATCTTATG GCTCTGGAGA AGCTTATCAT
TCGGGAGAAT CCTACGACGA GGAGGAGTGC ACGATACTGC TTACTTGCCC TGATAAAGAA
TACGATACTC TTATTCCTTT AGAATCAACG AAATATGATA CAATAGAAAT TAAGGAGTAT
CCATTTTATA TAGGGACTGC AAAAAATAAC CTGGGTTATA GTTTAATTAA CACCGCGGTT
AGTAGATATC ATGCAAAACT TGAAAAGGAT GAGAGTAGAT TTATATTAAC AGATCTTGAT
TCCACGAACG GGACTTTTGT AAATGGAAGA AAATTAATGC CAAACGAGAA TTTTGAAATA
AAGCAAGGAG ATACGGTTTC CTTTGCAAAC ATAGGTTTTA TCTTTCATTG TTTAAACAAG
TAG
 
Protein sequence
MGKEDIRSEW KRDMYHNYLI FNGRGEERAS FQEKMLEHNK IEGILSFQVH SIDNHKQFHY 
EVTGYQAISC ISEKVPLRLS QVTMLLNHLL AVLKDAKSYL LDTKDFVLLP EYTFIHLPDY
KLGLCYYPGY HVPLQEQLVA FLEFLMGSVD YQDKEAVLFV YSLYMKSKED SITIQELKSF
MEELEVKDKS DTLYMENGLE SQGKLDKVKE PQSNREPYQS KNTIKQPSNF NKHNEEKKNQ
KLKESLANPS RRNLLQYKVT SLLADTKERI LGKENENGAS KKYGNQKKET KKEHKYPFVK
EKLEQEEEIL YYPFFCYALF AVLFIVCIGI FLYTYQKGFL YQSLKKKIDG LKLISLLSVM
GVILGYGYLK IFAKERKLSR IITRTTYQMP DKEDLFSNSV SSEDNSLIEN SYRIHKQDNN
LNFNNLSNFT WENNESPMIY GEDSSSDYSG ESYGSGEAYH SGESYDEEEC TILLTCPDKE
YDTLIPLEST KYDTIEIKEY PFYIGTAKNN LGYSLINTAV SRYHAKLEKD ESRFILTDLD
STNGTFVNGR KLMPNENFEI KQGDTVSFAN IGFIFHCLNK