| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4529 |
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| Symbol | |
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| ID | 5756364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009998 |
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| Strand | - |
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| Start bp | 5401 |
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| End bp | 6276 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641290888 |
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| Product | type-F conjugative transfer system pilin assembly protein TraF |
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| Protein accession | YP_001556946 |
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| Protein GI | 160872939 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02739] type-F conjugative transfer system pilin assembly protein TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 0.92832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGACGT TGTTAAATAA CCGCTTACAA CATGCCGCAG CATCTCCTTT TTTTCGGTGG
TCAAGCCGCG CGCCGTTGGC GTGGTTGTCC ACAAAAAATG GGGATGCAGT GGTCAACAAG
CGCAGCGCGT TAGTGCTCCT TATGCTGACA ACGTTTTGCC ACGGTGCAAA CGCCACGGAT
GCACAAGGGT GGCGCTGGTA TAACGAACCG ACAGCCCCCA AGAAGCAAGC GCCTAAAAAG
GCCGAAACGC CAAGCGTCAC ACTCACGCGC ACCAAAACGC TGACGCCCAC CGAGCAGATG
GATTGGTTCC ACAGCTACTA CCAAGACACG CTCAATGACG CGGCGATAAA CAGCCAAGAC
AGCGAGAAAG TGGAAAAGGC CATGCTGCTT AATCAGTACG TCAGTAATAA ATCGTCAGAG
TTTGGCATGA CCTTCAAAAA GGTCCTGCTG GATAACCCTG AGCTGTCTTA CACCAAAGAC
AGGCCAACAG AGCAAGCGGC AAGAAGCACC TATTTATCAT TAGAGCGCAA CAAGAAGATG
CGCGCGGTAC GCAGCCTTGC CGATGCGGGA TGGGGGCTGT TCTTTGTCTA CAAAGGCCAA
GAAGAAATTG ATATTGCGCT AGCGCCCAGC GTGCAGCAGT TCGCTACAGA GCATGGCATT
GAGCTACTTG GCGTCACGCT CGATGGTGTC GCACTGCCAG CCATCGTGCA GAACCGTCAA
AACGACCAGC ACATAAACGT CCCGTTTAGT CCCGCACTCG TGTTAGTTAA TCCTGGCACG
GGGGAAATGA AACCGCTCGC TTATGGCTTT ATCTCTCAAG ACGATTTACT TGGCCGCTTC
CTGAACGTGG CCACCGATTT CGCCCCTGAC TTTTAA
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| Protein sequence | MRTLLNNRLQ HAAASPFFRW SSRAPLAWLS TKNGDAVVNK RSALVLLMLT TFCHGANATD
AQGWRWYNEP TAPKKQAPKK AETPSVTLTR TKTLTPTEQM DWFHSYYQDT LNDAAINSQD
SEKVEKAMLL NQYVSNKSSE FGMTFKKVLL DNPELSYTKD RPTEQAARST YLSLERNKKM
RAVRSLADAG WGLFFVYKGQ EEIDIALAPS VQQFATEHGI ELLGVTLDGV ALPAIVQNRQ
NDQHINVPFS PALVLVNPGT GEMKPLAYGF ISQDDLLGRF LNVATDFAPD F
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