| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3376 |
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| Symbol | |
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| ID | 5755180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 3988980 |
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| End bp | 3992360 |
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| Gene Length | 3381 bp |
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| Protein Length | 1126 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641289709 |
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| Product | CRISPR-associated helicase Cas3 family protein |
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| Protein accession | YP_001555798 |
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| Protein GI | 160876482 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR02562] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00110727 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGGTGA CTTTTATCAG TCAGTGCGAG AAAAATGCCC TGAAAAAGAC ACGCCGCGTG
CTGGATGCTT TTGCCAATCG CATAGGTGAT AACACTTGGC AAACTCTGAT CACGGAAGAT
GGGCTGTTAA CGGTTAAGAA AATGCTCAAA CAAACTGCAA GTCGAAGTAC TGCAGTGAGT
TGCCACTGGA TCCGCTCACG TTCTAGAACT CAGCTCTTGT GGATCGTGGG AAATCGATTG
AAATTTAATG AACAAGGCAT AGTGCCGGTG AATCGCACTC AGCTTAATTT GGAACATAAA
GAATGGGAGC AGGGCTGGCA TTTAAATGAA GTAATTGTCC TTACGTCGAG TATTGCTGGA
TTATTTCATG ATTTTGGAAA AGCGAATGAT TTATTTCAAT TAAAGCTTAA AGGGTTAACC
GAGTCTAAGG GGGAACCCTA TCGGCATGAG TGGGTGTCCC TGCGATTATT TGAAGCCTTT
GCTAATGGTT TAGCGGATAA GGATTGGCTG GAGAAATTGG CCAACATTGA TAAAAACAGT
ACTGAAATAG AGCAGCAGGT TTTGTCTAGG CTGTTTAAAG AAGACTCCGG ATATCAGCGA
CCTTTTGATC AACTTGCACC ATTTGCCAAA TTGGTGGCTT GGTTGATTGT ATCGCACCAC
CGACTTCCGC TCGCCCATGT AGGTAGCGTA CATACAAAGG AAATAGACAG CTGGCTCTCT
CATTGTTTTA GTTGCCATTG GAATTCAGCG AATGCAGAAA ACATGACGGC AATAGATACG
GATCTTATCA GGCAAAATTG GCAGTTTAGT CAAGGTACGC CACTCTTAAG TCGGCCTTGG
CAACATAAAG CCCGAAACTT AGCCGAACGT GCGCTGAATT GTCCATTGAT ATTGACTGAA
CAAGTTTGGC TTGAGCAACG CTTTGTTGGA CATATGGCGC GCTTGTCGTT GATGCTAGCC
GATCATTATT ATTCCTCTCT TCCCGCTGAA AAATCTAAAG TTCAGTGGCG AGATAAAACT
TACAACGCCT TTGCTAATAC TGATCATAAA AGATTGCCAC AGGCGGGTAA TGCGTTAAAG
CAACAGCTTG ATGAGCATAA TATTGGTGTG GCGGTGAATG CCCAGCGCTT TGCACAAAAC
TTACCTGCTT TAAAATATAC TTTACCAGCG ATTGCCCAAC ATAAGTTATT TAGTCAGAAC
GCGACAAACG CCAAGTATCG CTGGCAAGAT AAGGCTTTTG CTCAAGCTAA GTTGATAGCT
AAAGGCAGCG AGAGACAAGG TTTTTTCGGG GTCAATATGG CCTCAACCGG ATGCGGGAAA
ACCATAGCCA ATGCCCGCAT TATGTATGGT TTAGCAGATG AACGAGAAGG TTGCCGTTTT
TCAGTCGCAC TAGGTTTACG AACGCTTACC TTACAAACGG GTGATGCTTA TCGGGATTTA
CTTAAACTTG GGGATGATGA GCTAGCGGTA CTGATTGGTT CACAGGCCGT TAGCACCTTA
CATCAACTGA ACAATGCAAC ACCGCAGCAT AAGCAGATTG GTAGTGAGTC GGCAGAGGAT
CTTTTCGAAC AATTATTTAT TAGTTATCAA GGTCAAATTT ATGATGGGCG GTTAAAGCAC
TGGCTTGCTG CGAGTCCTAA ATTGGAGCAA TTAGTGAGTG CGCCCATTTT GGTTAGCACC
ATTGATCATC TAATGCCTGC AACTGAAAGC TTGCGAGGAG GTAAACAAAT TGCGCCTATG
TTGCGATTAC TCACCTCTGA TTTAATTTTA GATGAGCCGG ATGATTTTGG ACTTGAGGAC
TTACCCGCAC TATGTCGCTT AGTGAACTGG GCAGGCATGT TAGGTTCTAG AGTTTTACTG
TCATCAGCGA CACTGCCGCC ATCGTTGATC AAAACACTAT TTGATGCCTA TCATGCTGGC
CGCCAGCATT TTAATCAGGC GCATTTCGCC ACGACCGAAC AGCCTCCAAT CTGGTGTGCT
TGGTTTGATG AATATAAAAG TGAAACTTTA GAGATATCCA CCTCAAGATC TTATATTGAG
CAACATAAAA TTTTTGTGAG TAAAAGAGTT AAAAAGCTCG CTTGCCAACA AGTCGTCCGT
AGGGGAGAGC TGGTAAAGCT TGAATTAGCA TCGCCAACCA CCTTTGATGA GTGTGTTGCC
GCCACGCTAC ACAGATGTCT ACACCAGCTA CATGATATGC ACCATGTTGT ACATCCATCA
GGGCGTAAGG TGTCTTTAGG TGTTGTGCGT ATGGCTAATA TTAATCCAAT GATCGCTGTT
GCTAAGTTAC TGATTAACAT GTCACCGCAA GCCGATTACA GTATCCATTA CTGTGTTTAC
CATTCGCAGT TTCCATTAGC ACATCGCTCT TACAAAGAAA GTCGCCTCGA TAACGCCTTA
TCACGTCACG ATGAAGCCAA TTTGTGGCGC CAGCCTGAAA TTCAGCAGGC ATTATCAATG
ACCAATACTT CGAATAATAT TTTCATCGTG TTAGGCACTT CAGTCGTTGA AGTGGGGCGC
GATCATGACT ATGACTGGGC GATTGCTGAA CCTAGTTCAT TGCGAGCTTT AATCCAACTT
GCAGGACGTA TTCAACGTCA TCGTCAGCAG GTACCTAAGA CGGCTAATTT ATTAGTTTTA
AATAAAAATA TTCGGGCACT AAAAAATGAG CATCCAGCGT ACTGTAAGCC AGGGTTTGAA
AGTGCCGCTT TACCCTTACT ACAACATGAT TTAACCCAAT TACTGACTAC TGAACTCGAT
GCCATTTCGG CAATTCCAAG AATTATGGAG CCTGTGCCCA GTGCTAATGG CAGTGAATTT
CAATATAGCG ATCTGCACAA AAAACAACAT GCTCAGGCAG TAAACTCCTT TTGGGGGCAG
GAACATCGTG CTTTGCAACT GGCGTTAGGA CCTGTTGGCA AAGACAAAGC TGGAGTCATT
TTTTATCGCA GTTATAAAGA GGCCAATCTG TGGTGGAAGC ATGATGTTGC TTGGAGTGGG
GAGTTTATTC GCCAAACCGC ATTTCGCCAA TCGCAACCCC AAGAGGCATT TTTATTGCGA
TTACCAGAAG ATGAAATATT AACCTGGTGT CAATTAGATA CCACACATAA ACCCTATCAA
TATCCCACGT TAAACCATCG TTTTAACTCT GAAATAGTCC CGTTAGCTAA AGGATGTTTC
TGGTGGTTTA AACCATCGAC CGAACAAATA TATCAAGACT TGGCTGACTT ACTGGACAGT
TCGATCACTA AAGTGAGTGA GCAATTTGGT GAGATTAACC TTCGAATGGC AAATAAAGAT
CAACCCGCCC TAGTGTGGGC ATGGCACGAA CAACTTGGTG TGTACGAATG TAAAGACAAT
AAGGACAGCC CATGGAATTA A
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| Protein sequence | MMVTFISQCE KNALKKTRRV LDAFANRIGD NTWQTLITED GLLTVKKMLK QTASRSTAVS
CHWIRSRSRT QLLWIVGNRL KFNEQGIVPV NRTQLNLEHK EWEQGWHLNE VIVLTSSIAG
LFHDFGKAND LFQLKLKGLT ESKGEPYRHE WVSLRLFEAF ANGLADKDWL EKLANIDKNS
TEIEQQVLSR LFKEDSGYQR PFDQLAPFAK LVAWLIVSHH RLPLAHVGSV HTKEIDSWLS
HCFSCHWNSA NAENMTAIDT DLIRQNWQFS QGTPLLSRPW QHKARNLAER ALNCPLILTE
QVWLEQRFVG HMARLSLMLA DHYYSSLPAE KSKVQWRDKT YNAFANTDHK RLPQAGNALK
QQLDEHNIGV AVNAQRFAQN LPALKYTLPA IAQHKLFSQN ATNAKYRWQD KAFAQAKLIA
KGSERQGFFG VNMASTGCGK TIANARIMYG LADEREGCRF SVALGLRTLT LQTGDAYRDL
LKLGDDELAV LIGSQAVSTL HQLNNATPQH KQIGSESAED LFEQLFISYQ GQIYDGRLKH
WLAASPKLEQ LVSAPILVST IDHLMPATES LRGGKQIAPM LRLLTSDLIL DEPDDFGLED
LPALCRLVNW AGMLGSRVLL SSATLPPSLI KTLFDAYHAG RQHFNQAHFA TTEQPPIWCA
WFDEYKSETL EISTSRSYIE QHKIFVSKRV KKLACQQVVR RGELVKLELA SPTTFDECVA
ATLHRCLHQL HDMHHVVHPS GRKVSLGVVR MANINPMIAV AKLLINMSPQ ADYSIHYCVY
HSQFPLAHRS YKESRLDNAL SRHDEANLWR QPEIQQALSM TNTSNNIFIV LGTSVVEVGR
DHDYDWAIAE PSSLRALIQL AGRIQRHRQQ VPKTANLLVL NKNIRALKNE HPAYCKPGFE
SAALPLLQHD LTQLLTTELD AISAIPRIME PVPSANGSEF QYSDLHKKQH AQAVNSFWGQ
EHRALQLALG PVGKDKAGVI FYRSYKEANL WWKHDVAWSG EFIRQTAFRQ SQPQEAFLLR
LPEDEILTWC QLDTTHKPYQ YPTLNHRFNS EIVPLAKGCF WWFKPSTEQI YQDLADLLDS
SITKVSEQFG EINLRMANKD QPALVWAWHE QLGVYECKDN KDSPWN
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